 |
Job Description | P00892 | Confidence | 99.94% | Date | Thu Jan 5 10:57:00 GMT 2012 |
Rank | 56 | Aligned Residues | 144 |
% Identity | 20% | Template | d1ovma1 |
SCOP info | DHS-like NAD/FAD-binding domain
| DHS-like NAD/FAD-binding domain
| Pyruvate oxidase and decarboxylase, middle domain
|
Resolution | 2.65 |
|
 |
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | |
250 | . | . | . | . | . | . | . | . | . | 260 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | E | V | E | Q | A | R | Q | M | L | A | K | A | Q | K | P | M | L | Y | V | G | G | G | V | G | M | A | Q | A | V | P | A | L | R | E | F | L | A | A | T | K | M | P | A | T | C | T | L | K | G | L | G | A | V | E | A | D | Y | P | Y | Y | L | G | M | L | G | . |
M | H | G | T | K | A | A | N | F | A | V | Q |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
| . |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|
|
|   |
|
|   |   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | A | F | R | D | A | A | E | N | K | L | A | M | S | K | R | T | A | L | L | A | D | F | L | V | L | R | H | G | L | K | H | A | L | Q | K | W | V | K | E | V | P | M | A | H | A | T | M | L | M | G | K | G | I | F | D | E | R | Q | A | G | F | Y | G | T | Y | S | G | S | A | S | T | G | A | V | K | E | A | I | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |  |  |
|  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  | S |
|
|  |  |  |  |
| G | G | G | T | T | S | S |
| T | T | S | T | T |
|
|
|
|
|
| G | G | G | S |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
196 | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . |
  |
  |   |
262 | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | C | D | L | L | I | A | V | G | A | R | F | D | D | R | V | T | G | K | L | N | T | F | A | P | H | A | S | V | I | H | M | D | I | D | P | A | E | M | N | K | L | R | Q | A | H | V | A | L | Q | G | D | L | N | A | L | L | P | A | L | Q | Q | P | L | N |
Query Conservation |   |
  |
|
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |
|   |   |
|   |   |   |   |
Template Sequence |   |
G | A | D | T | V | L | C | V | G | T | R | F | T | D | T | L | T | A | G | F | T | H | Q | L | T | P | A | Q | T | I | E | V | Q | P | H | A | A | R | V | G | D | V | W | F | T | G | I | P | M | N | Q | A | I | E | T | L | V | E | L | C | K | Q | H | V | H |
Template Known Secondary structure |   |
T | S | S |  |  |  |  |  | S |
|
|
|
| T | T | T | T | T | T | T |
|
|
|
|
| T | T | T |  |  |  |  |
| S | S |  |  |  |  | T | T |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
276 | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|