Return to main results Retrieve Phyre Job Id

Job DescriptionP00892
Confidence99.44%DateThu Jan 5 10:57:00 GMT 2012
Rank79Aligned Residues128
% Identity20%Templatec3mosA_
PDB info PDB header:transferaseChain: A: PDB Molecule:transketolase; PDBTitle: the structure of human transketolase
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   399400.........410...... ...420.........430...... ...440.........450.........460.........470.
Predicted Secondary structure 






.....







..












Query SS confidence 

















. . . . .



















. .


































Query Sequence  GLGTMGFGLPAAVGAQVA. . . . . RPNDTVVCISGDGSFMMNVQ. . ELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQE
Query Conservation 
   

     






..... 
   

 
 




     ..

 

     

 


 

                
Alig confidence 

















.....



















..


































Template Conservation   

 

 


 
 
 
 
 
        
  




 
 

   


  
    
  

 
 
 
   
           
Template Sequence  ATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMD
Template Known Secondary structure 


STT
TS

S

TGGGGSTT
TT
SB
SSSB
TTTT
Template Predicted Secondary structure 
































Template SS confidence 















































































   121........130.........140.........150.........160.........170.........180.........190.........200
 
   472.......480.........490........ .500.........510.........520.........530.........
Predicted Secondary structure 















..





















Query SS confidence 


























. .








































Query Sequence  RYSETTLTDNPDFLMLASAFGIHGQHI. . TRKDQVEAALDTMLNSDGPYLLHVSIDELENVWPLVPPGAS
Query Conservation             
   

 
 
     
..    

  

  
    

 



  
      
       
Alig confidence  ...........















..













..
























Template Conservation  ...........         
     


 
   
  
   
 ..  
  
   
 

 
    
     
Template Sequence  . . . . . . . . . . . IYQKRCEAFGWHAIIVDGHSVEELCKAFGQAK. . HQPTAIIAKTFKGRGITGVEDKESW
Template Known Secondary structure  ...........TT
TT
S

..SS


TTTTSTTTTT
SS
Template Predicted Secondary structure  ...........








..
















Template SS confidence 





































































   201........210.........220.........230.. .......240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions