Job Description P00892 Confidence 93.75% Date Thu Jan 5 10:57:00 GMT 2012 Rank 126 Aligned Residues 102 % Identity 17% Template c3c2qA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized conserved protein; PDBTitle: crystal structure of conserved putative lor/sdh protein2 from methanococcus maripaludis s2 Resolution 2.00 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		L	A	A	T	K	M	P	A	T	C	T	L	K	G	L	G	A	V	E	A	D	Y	P	Y	Y	L	G	M	L	G	M	H	G	T	K	A	A	N	F	.	A	V	Q	E	C	D	L	L	I	A	V	G	A	R	F	D	D	R	V	T	G	K	L	N	T	F	A	P	H	A	S	V	I	H	M	D	I	D	P	A
Query Conservation																																									.
Alig confidence												.	.	.	.																										.																						.	.
Template Conservation												.	.	.	.																																																.	.
Template Sequence		C	I	K	N	N	I	P	Y	V	L	.	.	.	.	A	G	S	I	R	D	D	G	P	I	P	D	V	I	T	D	S	X	V	A	Q	D	K	X	R	T	T	V	X	D	K	K	X	V	I	X	L	S	T	L	L	H	S	V	A	T	G	.	.	N	L	X	P	S	Y	I	K	T	V	C	V	D	I	Q	P	S
Template Known Secondary structure					T	T						.	.	.	.				T	T		S	S			T	T		B															T	T		S						S										.	.	T	T			T	T	S							S
Template Predicted Secondary structure												.	.	.	.																																																.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.					.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
		299					300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.
Query SS confidence			.	.	.	.
Query Sequence		E	.	.	.	.	M	N	K	L	R	Q	A	H	V	A	L	Q	G	D	L	N	A	L	L	P	A	L	Q	Q	P	L	N	Q
Query Conservation			.	.	.	.
Alig confidence			.	.	.	.
Template Conservation
Template Sequence		T	V	T	K	L	X	D	R	G	T	S	Q	A	I	G	V	V	T	D	V	G	V	F	L	V	L	L	L	K	E	L	E	R
Template Known Secondary structure									T			S	S						S
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions