Job Description P00892 Confidence 29.08% Date Thu Jan 5 10:57:00 GMT 2012 Rank 238 Aligned Residues 129 % Identity 18% Template c3brcA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:conserved protein of unknown function; PDBTitle: crystal structure of a conserved protein of unknown function from2 methanobacterium thermoautotrophicum Resolution 1.60 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	T	F	P	H	A	E	V	E	Q	A	R	Q	M	L	A	K	A	Q	K	P	M	L	Y	V	G	G	G	V	G	M	A	Q	A	V	P	A	L	R	E	F	L	A	A	T	K	M	P	A	T	C	T	L	K	G	L	G	A	V	E	A	D	Y	P	Y	Y	L	G	M	L	G	M	H	G	T	K	A	A	N
Query Conservation
Alig confidence																															.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	G	D	R	S	E	E	V	E	A	I	R	K	Y	I	R	S	A	R	R	T	V	V	P	N	W	N	A	.	.	.	.	E	K	V	D	A	I	N	D	V	L	R	S	F	N	L	R	E	A	E	H	L	Q	F	N	T	N	W	A	D	L	T	R	.	.	.	.	.	.	.	.	.	.	X	P	A	V	T
Template Known Secondary structure				S																	S										.	.	.	.													T	T									S			G	G	G	G	G	S	S	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																															.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.											.	80	.	.	.
		258	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure						.	.	.	.	.																										.
Query SS confidence						.	.	.	.	.																										.
Query Sequence		F	A	V	Q	.	.	.	.	.	E	C	D	L	L	I	A	V	G	A	R	F	D	D	R	V	T	G	K	L	N	T	F	A	P	.	H	A	S	V	I	H	M	D	I	D	P	A	E	M	N	K	L	R	Q	A	H	V	A	L	Q	G	D	L	N	A	L	L	P	A	L
Query Conservation						.	.	.	.	.																										.
Alig confidence						.	.	.	.	.										.																.
Template Conservation																				.
Template Sequence		K	A	L	X	A	L	D	I	S	G	A	D	L	V	I	A	R	G	.	R	L	G	V	P	G	S	G	S	L	L	V	I	X	D	S	R	G	R	L	L	S	A	A	X	S	P	P	H	V	I	H	S	X	E	V	R	E	A	V	R	S	E	X	T	H	A	L	E	R	I
Template Known Secondary structure													S							.			S	S	T	T	S									T	T	S											T	T	T	S																		T	T
Template Predicted Secondary structure																				.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions