Return to main results Retrieve Phyre Job Id

Job DescriptionP00892
Confidence21.24%DateThu Jan 5 10:57:00 GMT 2012
Rank269Aligned Residues107
% Identity10%Templatec2x49A_
PDB info PDB header:protein transportChain: A: PDB Molecule:invasion protein inva; PDBTitle: crystal structure of the c-terminal domain of inva
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   113......120.........130.........140........ .150.........160.........170.........180.........
Predicted Secondary structure 





...



























Query SS confidence 



































. . .








































Query Sequence  DVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSG. . . RPGPVLVDIPKDIQLASGDLEPWFTTVENEVTFPHAEVEQA
Query Conservation 
         
              
  
   
   ...  


 
 

 
                         
   
Alig confidence 



































...








































Template Conservation 

  




       

   


 

  
 
 
       
 
 

 
 
  
  
   
     
  
 


     
Template Sequence  NMKLIMEALALWAPREKDVINLVEHIRGAMARYICHKFANGGELRAVMVSAEVEDVIRKGIRQTSGSTFLSLDPEASANL
Template Known Secondary structure 
TTT


TTTS



SS



Template Predicted Secondary structure 




















Template SS confidence 















































































   545....550.........560.........570.........580.........590.........600.........610.........620....
 
   190... ......200.........210.........220....
Predicted Secondary structure  ........










Query SS confidence 



. . . . . . . .






























Query Sequence  RQML. . . . . . . . AKAQKPMLYVGGGVGMAQAVPALREFLAATK
Query Conservation     
........  

 



 
 
     
   
  


   
Alig confidence 



........
















.....








Template Conservation 
  
          
  





  


 .....

 


   
Template Sequence  MDLITLKLDDLLIAHKDLVLLTSVDVRRF. . . . . IKKMIEGRF
Template Known Secondary structure  TT

S
GGG

TTT.....TTT
Template Predicted Secondary structure 






.....
Template SS confidence 










































   625....630.........640.........650... ......660..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions