Return to main results Retrieve Phyre Job Id

Job DescriptionP00892
Confidence100.00%DateThu Jan 5 10:57:00 GMT 2012
Rank13Aligned Residues521
% Identity25%Templatec2q27B_
PDB info PDB header:lyaseChain: B: PDB Molecule:oxalyl-coa decarboxylase; PDBTitle: crystal structure of oxalyl-coa decarboxylase from escherichia coli
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARATGKTGVCIATSGPGATNLIT
Query Conservation 


   
   
   

  


 

     
  

    
  
    
  
   
 
 
  

   

  
 


  
 
 
Alig confidence 















































































Template Conservation   

   
   
   

  


 

     
   
    
  
    
  
   
 
 
   
   
   
 
 
  
   
Template Sequence  TDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAEGIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLT
Template Known Secondary structure  TT




TTTTT

SSSS

S
Template Predicted Secondary structure 




















Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   81........90.........100... ......110.........120.........130.........140.........150........
Predicted Secondary structure 







..


















Query SS confidence 






















. .






















































Query Sequence  GLADALLDSIPVVAITGQVSAPF. . IGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIP
Query Conservation   
  
     


 
 
      .. 
    
  
         
              
  
   
     


 
 

Alig confidence 






















..






















































Template Conservation   
  
     


 
 
              
  
         
              
  
   
     


 
 

Template Sequence  ALANATVNGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPGGVYLDLP
Template Known Secondary structure  T



TTS

TT


GGGSS

SGGGSSS

Template Predicted Secondary structure 



























Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   159160......... 170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 










......


























Query SS confidence 










. . . . . .






























































Query Sequence  KDIQLASGDLE. . . . . . PWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLK
Query Conservation   
         ......                
      
  

 



 
 
     
   
  


    

  
  
Alig confidence 










......






























































Template Conservation   
                                      
  
 



  
 
         
  


    

     
Template Sequence  ANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIILGKGAAYSQADEQLREFIESAQIPFLPMSM
Template Known Secondary structure 
TT



SSSS





T
SS
T
TT


GG
Template Predicted Secondary structure 





































Template SS confidence 















































































   168.170.........180.........190.........200.........210.........220.........230.........240.......
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  GLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQG
Query Conservation   
       
   
  
          
  

 

 

  
                 
 

 
             
  
Alig confidence 
















.......























































Template Conservation    
 
        
   .......       
 

 

                    
 
                
  
Template Sequence  AKGILEDTHPLSAAAAR. . . . . . . SFALANADVVMLVGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVVG
Template Known Secondary structure  GTTSS
TT
TTB
GGG.......
SS


SGGGGGGTTTS
TT
S
GGGTTSSS

SS
Template Predicted Secondary structure 










.......
































Template SS confidence 















































































   248.250.........260.... .....270.........280.........290.........300.........310.........320
 
   313......320........ .330.........340.........350.........360........ .370.........380
Predicted Secondary structure 




..........















..




Query SS confidence 















. . . . . . . . . .







































. .











Query Sequence  DLNALLPALQQPLNQY. . . . . . . . . . DWQQHCAQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPAD. . CVVTTDVGQHQM
Query Conservation 
    
  
       ..........                       
        
       .. 

  
 
    
Alig confidence 















..........







































..











Template Conservation 
    
  
   
                                             
   
       
         
Template Sequence  DIASSMQGMLAELKQNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLD
Template Known Secondary structure 
T







SSB
T
TT
SS
Template Predicted Secondary structure 
























Template SS confidence 















































































   321........330.........340.........350.........360.........370.........380.........390.........400
 
   381........390.........400.........410.........420.........430.........440.........450.........460
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  WAAQHIAHTRPENFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGM
Query Conservation            
       
   

     






 
   

 
 




     

 

     

 


 

     
Alig confidence 



































.










































Template Conservation            
         
 

  
  






.    

 
 




      
 

    
 
 


 

     
Template Sequence  NARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVT. SGSPVVAIEGDSAFGFSGMEIETICRYNLPVTIVIFNNGGIYR
Template Known Secondary structure  S


SSS
STTTT
TT
.


TTTGGGT


SBSS
Template Predicted Secondary structure 
















.

















Template SS confidence 















































































   401........410.........420.........430...... ...440.........450.........460.........470.........
 
   461........470.........480.........490.........500.........510.........520.........530
Predicted Secondary structure 

































Query SS confidence 





































































Query Sequence  VRQWQQLFFQERYSETTLTDNPDFLMLASAFGIHGQHITRKDQVEAALDTMLNSDGPYLLHVSIDELENV
Query Conservation                        
   

 
 
     
    

  

  
    

 



  
     
Alig confidence 

















.


















































Template Conservation                    .   
   

 
 
     
    

  

        
 



  

    
Template Sequence  GDGVDLSGAGAPSPTDLL. HHARYDKLMDAFRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGT
Template Known Secondary structure  S



TTSS



TTB

.TT

GGGGGGGGT

STS
B
TTS

Template Predicted Secondary structure 















.




















Template SS confidence 





































































   480.........490....... ..500.........510.........520.........530.........540........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions