Job Description P00892 Confidence 100.00% Date Thu Jan 5 10:57:00 GMT 2012 Rank 7 Aligned Residues 540 % Identity 29% Template c2panF_ PDB info PDB header:lyase Chain: F: PDB Molecule:glyoxylate carboligase; PDBTitle: crystal structure of e. coli glyoxylate carboligase Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.																									.
Query SS confidence																																						.																									.
Query Sequence		N	G	A	Q	W	V	V	H	A	L	R	A	Q	G	V	N	T	V	F	G	Y	P	G	G	A	I	M	P	V	Y	D	A	L	Y	D	G	.	G	V	E	H	L	L	C	R	H	E	Q	G	A	A	M	A	A	I	G	Y	A	R	A	T	.	G	K	T	G	V	C	I	A	T	S	G	P	G	A	T	N	L	I
Query Conservation																																						.																									.
Alig confidence																																						.																									.
Template Conservation
Template Sequence		R	A	V	D	A	A	X	Y	V	L	E	K	E	G	I	T	T	A	F	G	V	P	G	A	A	I	N	P	F	Y	S	A	X	R	K	H	G	G	I	R	H	I	L	A	R	H	V	E	G	A	S	H	X	A	E	G	Y	T	R	A	T	A	G	N	I	G	V	C	L	G	T	S	G	P	A	G	T	D	X	I
Template Known Secondary structure														T	T										G	G	G																			S	S															S	T	T									S	T					T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	L	A	D	A	L	L	D	S	I	P	V	V	A	I	T	G	Q	V	S	A	P	F	I	G	T	D	A	F	Q	E	V	D	V	L	G	L	S	L	A	C	T	K	H	S	F	L	V	Q	S	L	E	E	L	P	R	I	M	A	E	A	F	D	V	A	C	S	G	R	P	G	P	V	L	V	D	I	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	L	Y	S	A	S	A	D	S	I	P	I	L	C	I	T	G	Q	A	P	R	A	R	L	H	K	E	D	F	Q	A	V	D	I	E	A	I	A	K	P	V	S	K	X	A	V	T	V	R	E	A	A	L	V	P	R	V	L	Q	Q	A	F	H	L	X	R	S	G	R	P	G	P	V	L	V	D	L	P	F
Template Known Secondary structure										T	T												G	G	G	T	T	T	T		T	T									G	G	G	S	S							S	G	G	G														S	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		160	.	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		D	I	Q	L	A	S	G	.	.	D	L	E	P	W	F	T	T	V	E	N	E	V	T	F	P	H	A	E	V	E	Q	A	R	Q	M	L	A	K	A	Q	K	P	M	L	Y	V	G	G	G	V	G	M	A	Q	A	V	P	A	L	R	E	F	L	A	A	T	K	M	P	A	T	C	T	L	K	G	L	G	A	V
Query Conservation									.	.
Alig confidence									.	.
Template Conservation
Template Sequence		D	V	Q	V	A	E	I	E	F	D	P	D	X	Y	E	P	L	P	V	Y	K	P	A	A	S	R	X	Q	I	E	K	A	V	E	X	L	I	Q	A	E	R	P	V	I	V	A	G	G	G	V	I	N	A	D	A	A	A	L	L	Q	Q	F	A	E	L	T	S	V	P	V	I	P	T	L	X	G	W	G	C	I
Template Known Secondary structure						S						G	G	G																									T		S	S												T	T													T							T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		E	A	D	Y	P	Y	Y	L	G	M	L	G	M	H	.	G	T	K	A	A	N	F	A	V	Q	E	C	D	L	L	I	A	V	G	A	R	F	D	D	R	V	T	G	K	L	N	T	F	A	P	H	A	S	V	I	H	M	D	I	D	P	A	E	M	N	K	L	R	Q	A	H	V	A	L	Q	G	D	L	N	A
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		P	D	D	H	E	L	X	A	G	X	V	G	L	Q	T	A	H	R	Y	G	N	A	T	L	L	A	S	D	X	V	F	G	I	G	N	R	F	A	N	R	H	T	G	S	V	E	K	Y	T	E	G	R	K	I	V	H	I	D	I	E	P	T	Q	I	G	R	V	L	C	P	D	L	G	I	V	S	D	A	K	A
Template Known Secondary structure			T	T	S	T	T	B					S	S	S	S													S						S									S	S						T	T								S		G	G	G	T	T	S	S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		317	.	.	320	.	.	.	.	.	.											.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	P	A	L	Q	Q	P	L	N	.	.	.	.	.	.	.	.	.	.	Q	Y	D	W	Q	Q	H	C	A	Q	L	R	D	E	H	S	W	R	Y	D	H	P	G	D	A	I	Y	A	P	L	L	L	K	Q	L	S	D	R	K	P	A	D	C	V	V	T	T	D	V	G	Q	H	Q	M	W	A	A	Q	H	I
Query Conservation												.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	T	L	L	V	E	V	A	Q	E	X	Q	K	A	G	R	L	P	C	R	K	E	W	V	A	D	C	Q	Q	R	K	R	T	L	L	R	K	T	H	F	D	N	V	P	V	K	P	Q	R	V	Y	E	E	X	N	K	A	F	G	R	D	V	C	Y	V	T	T	I	G	L	S	Q	I	A	A	A	Q	X	L
Template Known Secondary structure																T	T		S															T	T	S									S	S	B													S		T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	T	R	P	E	N	F	I	T	S	S	G	L	G	T	M	G	F	G	L	P	A	A	V	G	A	Q	V	A	R	P	N	D	T	V	V	C	I	S	G	D	G	S	F	M	M	N	V	Q	E	L	G	T	V	K	R	K	Q	L	P	L	K	I	V	L	L	D	N	Q	R	L	G	M	V	R	Q	W	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	F	K	D	R	H	W	I	N	C	G	Q	A	G	P	L	G	W	T	I	P	A	A	L	G	V	C	A	A	D	P	K	R	N	V	V	A	I	S	G	D	F	D	F	Q	F	L	I	E	E	L	A	V	G	A	Q	F	N	I	P	Y	I	H	V	L	V	N	N	A	Y	L	G	L	I	R	Q	S	Q	R
Template Known Secondary structure					S	T	T	S					T	T	T			T	T														T	T															T	G	G	G							T	T											S	B								G	G
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
		467	.	.										470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.					.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																												.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.																																												.	.	.	.
Query Sequence		L	F	F	.	.	.	.	.	.	.	.	.	Q	E	R	Y	S	E	T	T	L	T	D	N	P	D	F	L	M	L	A	S	A	F	G	I	H	G	Q	H	I	T	R	K	D	Q	V	E	A	A	L	D	T	M	L	.	.	.	.	N	S	D	G	P	Y	L	L	H	V	S	I	D	E	L	E	N	V	W	P	L
Query Conservation					.	.	.	.	.	.	.	.	.																																												.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.																																												.	.	.	.																	.	.	.	.
Template Conservation																																																																													.	.	.	.
Template Sequence		A	F	D	X	D	Y	C	V	Q	L	A	F	E	N	I	N	S	S	E	V	N	G	Y	G	V	D	H	V	K	V	A	E	G	L	G	C	K	A	I	R	V	F	K	P	E	D	I	A	P	A	F	E	Q	A	K	A	L	X	A	Q	Y	R	V	P	V	V	V	E	V	I	L	E	R	V	T	.	.	.	.	N
Template Known Secondary structure		G	G	T				S		B						T	T		S	T	T	T	T												T	T								S	G	G	G																	S								B		S			.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.
Template SS confidence
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.					560
		534	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	P	G	A	S	N	S	E	M	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	X	G	S	E	L	D	N	V	X	E
Template Known Secondary structure				B		S	S	G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		561	.	.	.	.	.	.	.	.	570	.	.