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Job DescriptionP00892
Confidence100.00%DateThu Jan 5 10:57:00 GMT 2012
Rank21Aligned Residues523
% Identity22%Templatec2nxwB_
PDB info PDB header:lyaseChain: B: PDB Molecule:phenyl-3-pyruvate decarboxylase; PDBTitle: crystal structure of phenylpyruvate decarboxylase of azospirillum2 brasilense
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30........ .40.........50.........60.........70.........
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Query Sequence  MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGG. VEHLLCRHEQGAAMAAIGYARATGKTGVCIATSGPGATNLI
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Template Sequence  MKLAEALLRALKDRGAQAMFGIPGDFALPFFKVAEETQILPLHTLSHEPAVGFAADAAARYSSTLGVAAVTYGAGAFNMV
Template Known Secondary structure  TT





GGG
SS

SSTS

TTTT
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   1........10.........20.........30.........40.........50.........60.........70.........80
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  TGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPK
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Template Sequence  NAVAGAYAEKSPVVVISGAPGTTELLDTQFQ. . . . . . VFKEITVAQARLDDPAKAPAEIARVLGAARAQS. RPVYLEIPR
Template Known Secondary structure  TT



TT



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S



TTTT.S
G
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   81........90.........100.........110. ........120.........130.........140.... .....150...
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  DIQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLGAVEA
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Template Sequence  NMVNAEVEPVGDDPAWPVDRDALAACADEVLAAMRSATSPVLMVCVEVRRYGLEAKVAELAQRLGVPVVTTFMGRGLLAD
Template Known Secondary structure  GGTT













SS
TT

S

GGGTTTTTT
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   166...170.........180.........190.........200.........210.........220.........230.........240.....
 
   240....... ..250.........260.........270.........280.........290.........300.........310........
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Query Sequence  DYPYYLGM. LGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALL
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Template Sequence  APTPPLGTYIGVAGDAEITRLVEESDGLFLLGAILSDTNFAVSQRKIDLRKTIHAFDRAVTLGYHTYADIPLAGLVDALL
Template Known Secondary structure  SSS

S
B

GGGS
T
SS

B
SSTTSB
GGGS
TTT
TTTT
S

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   246...250.........260.........270.........280.........290.........300.........310.........320.....
 
   319320.........330.........340.........350.........360.........370.........380.........390........
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Query Sequence  PALQQPLNQYDWQQHCAQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPENFITSS
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Template Sequence  ERLPPSDRTTRGKEPHAYPTGL. . QADGEPIAPMDIARAVNDRVRAGQEPLLIAADMGDCLFTAMDMI. . . . DAGLMAPG
Template Known Secondary structure  TTS






TTS








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SSSB

TT




SSTTS
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S


T
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   326...330.........340....... ..350.........360.........370.........380.........390. ........
 
   399400.........410.........420.........430.........440.........450.........460.........470........
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Query Sequence  GLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTL
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Template Sequence  YYAGMGFGVPAGIGAQCVSGGKRILTVVGDGAFQMTGWELGNCRRLGIDPIVILFNNASWEMLRTFQP. . . . . . ESAFND
Template Known Secondary structure  TT

TT
STT

GGGGGGT



SB

T......T
GGGB
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   400.........410.........420.........430.........440.........450.........460....... ..470...
 
   479480.........490.........500.........510...... ...520.........530.........540..
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Query Sequence  TDNPDFLMLASAFGIHGQHITRKDQVEAALDTMLNSDG. PYLLHVSIDELENVWPLVPPGASNSE
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Template Sequence  LDDWRFADMAAGMGGDGVRVRTRAELKAALDKAFATRGRFQLIEAMIPRGVLSDTLARFVQGQKR
Template Known Secondary structure 




GGGT

B

SS


TT



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   474.....480.........490.........500.........510.........520.........530........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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