Job Description P00892 Confidence 89.25% Date Thu Jan 5 10:57:00 GMT 2012 Rank 132 Aligned Residues 71 % Identity 10% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		E	V	E	Q	A	R	Q	M	L	A	K	A	Q	K	P	M	L	Y	V	G	G	G	V	G	M	A	Q	A	V	P	A	L	R	E	F	L	A	A	T	K	M	P	A	T	C	T	L	K	G	L	G	A	V	E	A	D	Y	P	Y	Y	L	G	M	L	G	M	H	G	T	K	A	A	N	F	A	V	Q	.	.	E
Query Conservation																																																																															.	.
Alig confidence																																														.	.	.	.	.	.												.	.	.	.	.	.	.										.	.
Template Conservation																																														.	.	.	.	.	.												.	.	.	.	.	.	.
Template Sequence		T	C	S	K	L	A	Y	Y	Y	Q	R	K	G	W	K	T	C	L	I	C	A	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	I	P	F	Y	.	.	.	.	.	.	G	S	Y	T	E	M	D	P	V	I	I	.	.	.	.	.	.	.	A	S	E	G	V	E	K	F	K	N	E	N
Template Known Secondary structure													T	T											S	S	S														T					.	.	.	.	.	.						S						.	.	.	.	.	.	.											T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.												.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160							.	.	.	.	.	.	.	.	.	170	.								.	.	.	.	.	.	.	.	180	.	.	.
		263	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	L	L	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	I	I	I	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions