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Job DescriptionP00892
Confidence100.00%DateThu Jan 5 10:57:00 GMT 2012
Rank10Aligned Residues531
% Identity29%Templatec2ag1A_
PDB info PDB header:lyaseChain: A: PDB Molecule:benzaldehyde lyase; PDBTitle: crystal structure of benzaldehyde lyase (bal)- semet
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLCRHEQGAAMAAIGYARATGKTGVCIATSGPGATNLIT
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Template Sequence  ITGGELVVRTLIKAGVEHLFGLHGAHIDTIFQACLDHDVPIIDTRHEAAAGHAAEGYARAGAKLGVALVTAGGGFTNAVT
Template Known Secondary structure  T





GGGT


SSTS

TTT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   81........90.........100.........110. ........120.........130.........140.........150.........
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Query Sequence  GLADALLDSIPVVAITGQVSAPFIGTDAFQE. VDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIPK
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Template Sequence  PIANAWLDRTPVLFLTGSGALRDDETNTLQAGIDQVAXAAPITKWAHRVXATEHIPRLVXQAIRAALSAPRGPVLLDLPW
Template Known Secondary structure  T



STTTTS

TT

S
GGG
S


GGGSSS


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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   160.........170.. .......180.........190.........200.........210.........220.........230.....
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Query Sequence  DIQLASGDLEPWF. . . . TTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKGLG
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Template Sequence  DILXNQIDEDSVIIPDLVLSAHGARPDPADLDQALALLRKAERPVIVLGSEASRTARKTALSAFVAATGVPVFADYEGLS
Template Known Secondary structure 

TTSS







SS





SS
T




GGGGG
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   236...240.........250.........260.........270.........280..... ....290.........300.........310....
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Query Sequence  AVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFA. PHASVIHMDIDPAEMNKLRQAHVALQGDL
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Template Sequence  XLSGLPDAXRGGLVQ. NLYSFAKADAAPDLVLXLGARFGLNTGHGSGQLIPHSAQVIQVDPDACELGRLQGIALGIVADV
Template Known Secondary structure  GGTTS
GGGGG.GGGGGGGGT


SS

SSGGGTTTS
SSS
TTS
SSGGGTTSSS

S
S
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   244.....250........ .260.........270.........280.........290.........300.........310.........320..
 
   315....320.........330. ........340.........350.........360.........370.........380....
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Query Sequence  NALLPALQQPLNQYDWQ. . . . . . . . . . QHCAQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQ
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Template Conservation     
  
                                                 
        
   
 
        
Template Sequence  GGTIEALAQATAQDAAWPDRGDWCAKVTDLAQERYASIAAKSSSEHALHPFHASQVIAKHVDAGVTVVADGALTYLWLSE
Template Known Secondary structure  TT





TT


SSS

TT
STT
ST
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   323......330.........340.........350.........360.........370.........380.........390.........400..
 
   385....390.........400.........410...... ...420.........430.........440.........450.........460..
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Query Sequence  HIAHTRPENFITSSGLGTMGFGLPAAVGAQVA. . RPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVR
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Template Sequence  VXSRVKPGGFLCHGYLGSXGVGFGTALGAQVADLEAGRRTILVTGDGSVGYSIGEFDTLVRKQLPLIVIIXNNQSWGATL
Template Known Secondary structure  TTS

S


TT

TTTTT
GGGTTTT



SB
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   403......410.........420.........430.........440.........450.........460.........470.........480..
 
   463......470.........480.........490.........500.........510.........520.........530..
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Query Sequence  QWQQLFFQERYSETTLTDNPDFLMLASAFGIHGQHITRKDQVEAALDTMLNSDGPYLLHVSIDELENVWP
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Template Sequence  HFQQLAVGPNRVTGTRLENGSYHGVAAAFGADGYHVDSVESFSAALAQALAHNRPACINVAVALDPIPPE
Template Known Secondary structure  T
TT


S
B




TTS
SSSS


SS


TT
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   483......490.........500.........510.........520.........530.........540.........550..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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