Job Description P00892 Confidence 100.00% Date Thu Jan 5 10:57:00 GMT 2012 Rank 11 Aligned Residues 532 % Identity 21% Template c1zpdA_ PDB info PDB header:alcohol fermentation Chain: A: PDB Molecule:pyruvate decarboxylase; PDBTitle: pyruvate decarboxylase from zymomonas mobilis Resolution 1.86 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		M	N	G	A	Q	W	V	V	H	A	L	R	A	Q	G	V	N	T	V	F	G	Y	P	G	G	A	I	M	P	V	Y	D	A	L	Y	D	.	G	G	V	E	H	L	L	C	R	H	E	Q	G	A	A	M	A	A	I	G	Y	A	R	A	T	G	K	T	G	V	C	I	A	T	S	G	P	G	A	T	N	L	I
Query Conservation																																						.
Alig confidence																																						.																																.
Template Conservation																																																																						.
Template Sequence		Y	T	V	G	T	Y	L	A	E	R	L	V	Q	I	G	L	K	H	H	F	A	V	A	G	D	Y	N	L	V	L	L	D	N	L	L	L	N	K	N	M	E	Q	V	Y	C	C	N	E	L	N	C	G	F	S	A	E	G	Y	A	R	A	K	G	A	A	A	A	V	.	V	T	Y	S	V	G	A	L	S	A	F
Template Known Secondary structure			B												T	T		S								T	T	T									T		T	T	S						S	S																S						.			T	T	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.									110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.
Query Sequence		T	G	L	A	D	A	L	L	D	S	I	P	V	V	A	I	T	G	Q	V	S	A	P	F	I	G	T	D	A	F	.	.	.	.	.	.	.	.	Q	E	V	D	V	L	G	L	S	L	A	C	T	K	H	S	F	L	V	Q	S	L	E	E	L	P	R	I	M	A	E	A	F	D	V	A	C	S	G	R	P	G
Query Conservation																																.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.																																									.
Template Conservation																																																																																.
Template Sequence		D	A	I	G	G	A	Y	A	E	N	L	P	V	I	L	I	S	G	A	P	N	N	N	D	H	A	A	G	H	V	L	H	H	A	L	G	K	T	D	Y	H	Y	Q	L	E	M	A	K	N	I	T	A	A	A	E	A	I	Y	T	P	E	E	A	P	A	K	I	D	H	V	I	K	T	A	L	R	E	K	.	K
Template Known Secondary structure										T	T												G	G	G	T	T	T	T				T	T	S		S	S	S										G	G	G		S							S	G	G	G																T	.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		P	V	L	V	D	I	P	K	D	I	Q	L	A	S	G	D	L	E	P	W	F	T	T	V	E	N	E	V	T	F	P	H	A	E	.	.	.	.	V	E	Q	A	R	Q	M	L	A	K	A	Q	K	P	M	L	Y	V	G	G	G	V	G	M	A	Q	A	V	P	A	L	R	E	F	L	A	A	T	K	M	P	A
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.
Template Conservation
Template Sequence		P	V	Y	L	E	I	A	C	N	I	A	S	M	P	C	A	A	P	G	P	A	S	A	L	F	N	D	E	A	S	D	E	A	S	L	N	A	A	V	D	E	T	L	K	F	I	A	N	R	D	K	V	A	V	L	V	G	S	K	L	R	A	A	G	A	E	E	A	A	V	K	F	T	D	A	L	G	G	A	V
Template Known Secondary structure									T	T	S	T	T	S	B							G	G	G	G	G																						T	T		S								T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.		.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		T	C	T	L	K	G	L	G	A	V	E	A	D	Y	P	Y	Y	L	G	M	L	.	G	M	H	G	T	K	A	A	N	F	A	V	Q	E	C	D	L	L	I	A	V	G	A	R	F	D	D	R	V	T	G	K	L	N	T	F	A	P	H	A	S	V	I	H	M	D	I	D	P	A	E	M	N	K	L	R	Q	A
Query Conservation																							.
Alig confidence																							.
Template Conservation
Template Sequence		A	T	M	A	A	A	K	S	F	F	P	E	E	N	A	L	Y	I	G	T	S	W	G	E	V	S	Y	P	G	V	E	K	T	M	K	E	A	D	A	V	I	A	L	A	P	V	F	N	D	Y	S	T	T	G	W	T	D	I	P	D	P	K	K	L	V	L	A	E	P	R	S	V	V	V	N	G	I	R	F	P
Template Known Secondary structure					G	G	G	T	T	S	S		T	T	S	T	T							G	G	G	S		T	T									S						S					T	T	T	T	T	T	T	T					G	G	G						S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		H	V	A	L	Q	G	D	L	N	A	L	L	P	A	L	Q	Q	P	L	N	Q	Y	D	W	Q	Q	H	C	A	Q	L	R	D	E	H	S	W	R	Y	D	H	P	.	.	.	G	D	A	I	Y	A	P	L	L	L	K	Q	L	S	D	R	K	P	A	D	C	V	V	T	T	D	V	G	Q	H	Q	M	W	A	A
Query Conservation																																												.	.	.
Alig confidence				.	.	.	.																																					.	.	.																																.
Template Conservation				.	.	.	.																																																																							.
Template Sequence		S	V	.	.	.	.	H	L	K	D	Y	L	T	R	L	A	Q	K	V	S	K	K	T	G	S	L	D	F	F	K	S	L	N	A	G	E	L	K	K	A	A	P	A	D	P	S	A	P	L	V	N	A	E	I	A	R	Q	V	E	A	L	L	T	P	N	T	T	V	I	A	E	T	G	D	S	W	.	F	N	A
Template Known Secondary structure		S		.	.	.	.																										T				S									T	T	S	B													T			T	T							S	S				.
Template Predicted Secondary structure				.	.	.	.																																																																							.
Template SS confidence
		321	.					.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.		.	.	.
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	I	A	H	T	R	P	E	N	F	I	T	S	S	G	L	G	T	M	G	F	G	L	P	A	A	V	G	A	Q	V	A	R	P	N	D	T	V	V	C	I	S	G	D	G	S	F	M	M	N	V	Q	E	L	G	T	V	K	R	K	Q	L	P	L	K	I	V	L	L	D	N	Q	R	L	G	M	V	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	M	K	L	P	N	G	A	R	V	E	Y	E	M	Q	W	G	H	I	G	W	S	V	P	A	A	F	G	Y	A	V	G	A	P	E	R	R	N	I	L	M	V	G	D	G	S	F	Q	L	T	A	Q	E	V	A	Q	M	V	R	L	K	L	P	V	I	I	F	L	I	N	N	Y	G	Y	T	I	E	V	M
Template Known Secondary structure			T					T	T							T	T	T			T	T	T													T	T	S															G	G	G							T	T											S	S						T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
		464	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.										.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.		.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.																						.
Query SS confidence																															.	.	.	.	.	.	.	.	.																						.
Query Sequence		W	Q	Q	L	F	F	Q	E	R	Y	S	E	T	T	L	T	D	N	P	D	F	L	M	L	A	S	A	F	G	.	.	.	.	.	.	.	.	.	I	H	G	Q	H	I	T	R	K	D	Q	V	E	A	A	L	D	T	M	L	N	.	S	D	G	P	Y	L	L	H	V	S	I	D	E	L	E	N	V	W	P	L
Query Conservation																															.	.	.	.	.	.	.	.	.																						.
Alig confidence										.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.																						.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		I	H	D	G	P	Y	N	N	.	.	.	.	.	.	.	I	K	N	W	D	Y	A	G	L	M	E	V	F	N	G	N	G	G	Y	D	S	G	A	A	K	G	L	K	A	K	T	G	G	E	L	A	E	A	I	K	V	A	L	A	N	T	D	G	P	T	L	I	E	C	F	I	G	R	E	D	C	T	E	E	L
Template Known Secondary structure		T	S			G	G	G		.	.	.	.	.	.	.																T	T	S	S	S										S	B																S	S										T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.								.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	P	G	A	S	N	S	E	M	L	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	W	G	K	R	V	A	A	A	N	S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		549	550	.	.	.	.	.	.	.	.	.	560	.