Return to main results Retrieve Phyre Job Id

Job DescriptionP00892
Confidence22.06%DateThu Jan 5 10:57:00 GMT 2012
Rank259Aligned Residues81
% Identity14%Templatec1tufA_
PDB info PDB header:lyaseChain: A: PDB Molecule:diaminopimelate decarboxylase; PDBTitle: crystal structure of diaminopimelate decarboxylase from m.2 jannaschi
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   427..430.........440.........450.........460.........470.........480.........490.........500......
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  GDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIHGQHITRKDQVEA
Query Conservation 




     

 

     

 


 

                           
   

 
 
     
    

  
Alig confidence 






























......................


























Template Conservation 
 
  
 
  
   
   
     
   

 ......................
    
  
   
   
 


  

  
Template Sequence  GCGADVVSGGELYIAKLSNVPSKKIVFNGNC. . . . . . . . . . . . . . . . . . . . . . KTKEEIIMGIEANIRAFNVDSISELIL
Template Known Secondary structure  T

STT

GGG

S
......................

TT
S

Template Predicted Secondary structure 












......................






Template SS confidence 















































































   98.100.........110.........120........ .130.........140.........150.....
 
   507..510.........520.........
Predicted Secondary structure 









Query SS confidence 






















Query Sequence  ALDTMLNSDGPYLLHVSIDELEN
Query Conservation 

  
    

 



  
    
Alig confidence 






















Template Conservation 
   
        
 



    
Template Sequence  INETAKELGETANVAFRINPNVN
Template Known Secondary structure  T

B



Template Predicted Secondary structure 








Template SS confidence 






















   156...160.........170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions