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Job DescriptionP00892
Confidence100.00%DateThu Jan 5 10:57:00 GMT 2012
Rank2Aligned Residues537
% Identity26%Templatec1powA_
PDB info PDB header:oxidoreductase(oxygen as acceptor)Chain: A: PDB Molecule:pyruvate oxidase; PDBTitle: the refined structures of a stabilized mutant and of wild-type2 pyruvate oxidase from lactobacillus plantarum
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30....... ..40.........50.........60.........70........
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Query Sequence  MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDG. . GVEHLLCRHEQGAAMAAIGYARATGKTGVCIATSGPGATNL
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Template Sequence  ILAGAAVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHL
Template Known Secondary structure  TT




GGGTTTTS
SSSS

TTTT
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   11........20.........30.........40.........50.........60.........70.........80.........90
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  ITGLADALLDSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVACSGRPGPVLVDIP
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Template Sequence  MNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQ. GVAVVQIP
Template Known Secondary structure  TT



TTTTTS

TT



TTT


SSST.S
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   91........100.........110.........120.........130.........140.........150.........160. ........
 
   159160.........170...... ...180.........190.........200.........210.........220.........230...
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Query Sequence  KDIQLASGDLEPWFTTVE. . . . . NEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPATCTLKG
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Template Sequence  VDLPWQQIPAEDWYASANSYQTPLLPEPDVQAVTRLTQTLLAAERPLIYYGIGAR. . KAGKELEQLSKTLKIPLMSTYPA
Template Known Secondary structure  TTGGGSGGG



GGG









T
SS
GGGG..GGT


GGG
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   170.........180.........190.........200.........210.........220.... .....230.........240.......
 
   234.....240.........250.........260.........270.........280.........290.........300.........310...
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Query Sequence  LGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDRVTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGD
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Template Sequence  KGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEVSKA. . FKNTRYFLQIDIDPAKLGKRHKTDIAVLAD
Template Known Secondary structure  TTSS
TT
TTB



SSS


SS


TTTT..TTT
S
S
GGGTTSSS

S
S
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   248.250.........260.........270.........280.........290..... ....300.........310.........320.....
 
   314.....320....... ..330.........340.........350.........360.........370.........380......
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Query Sequence  LNALLPALQQPLNQ. . . . . . . YDWQQHCAQLRDEHSWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHI
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Template Sequence  AQKTLAAILAQVSERESTPWWQANLANVKNWRAYLASLEDKQEGPLQAYQVLRAVNKIAEPDAIYSIDVGDINLNANRHL
Template Known Secondary structure  T






T

SSB



TT

SS
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   326...330.........340.........350.........360.........370.........380.........390.........400.....
 
   387..390.........400.........410.........420.........430.........440.........450.........460......
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Query Sequence  AHTRPENFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKIVLLDNQRLGMVRQWQQ
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Template Sequence  KLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLAGDGGASMTMQDLATQVQYHLPVINVVFTNCQYGFIKDEQE
Template Known Secondary structure 


TT



SS

TTT
TTS
GGGTT


SB
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   406...410.........420.........430.........440.........450.........460.........470.........480.....
 
   467..470.........480.........490.........500.........510... ......520.........530.... .....540
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Query Sequence  LFFQERYSETTLTDNPDFLMLASAFGIHGQHITRKDQVEAALDTMLN. . SDGPYLLHVSIDELENVWPLV. . . . PPGASN
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Template Sequence  DTNQNDFIG. VEFNDIDFSKIADGVHMQAFRVNKIEQLPDVFEQAKAIAQHEPVLIDAVITGDRPLPAEKLRLDSAMSSA
Template Known Secondary structure 
SS


S.SB




TT

BGGGTTTS








TTS



TTTS
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   486...490.... .....500.........510.........520.........530.........540.........550.........560....
 
   541..
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Query Sequence  SEM
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Template Sequence  ADI
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   565..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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