Return to main results Retrieve Phyre Job Id

Job DescriptionP00892
Confidence97.79%DateThu Jan 5 10:57:00 GMT 2012
Rank91Aligned Residues236
% Identity13%Templatec1olsB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:2-oxoisovalerate dehydrogenase beta subunit; PDBTitle: roles of his291-alpha and his146-beta' in the reductive2 acylation reaction catalyzed by human branched-chain3 alpha-ketoacid dehydrogenase
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20. ........30....... ..40.... .....50.........60.........70........
Predicted Secondary structure 



...





.

.





Query SS confidence 

















. . .















.






.

































Query Sequence  AQWVVHALRAQGVNTVFG. . . YPGGAIMPVYDALYDG. GVEHLLC. RHEQGAAMAAIGYARATGKTGVCIATSGPGATNL
Query Conservation     
   
   

  


... 

     
  

   . 
  
  .  
  
   
 
 
  

   

  
 


  
 
Alig confidence 

















...















.






.



















.












Template Conservation    

      
  
     
   

       
    

 
  
 



   

 




  
  
.

      
  

Template Sequence  TSALDNSLAKDPTAVIFGEDVAFGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIAVTGATA. IAEIQFADYIFPA
Template Known Secondary structure 
TT
TTTTTT
TTSTTTT
TTT

S
TT

.
SSGGG
GGG
Template Predicted Secondary structure 

























.
Template SS confidence 















































































   28.30.........40.........50.........60.........70.........80.........90... ......100......
 
   7980....... ..90.........100.........110.........120. ........130.........140........
Predicted Secondary structure  .........

















.




Query SS confidence 








. . . . . . . . .

































.


























Query Sequence  ITGLADALL. . . . . . . . . DSIPVVAITGQVSAPFIGTDAFQEVDVLGLSLAC. TKHSFLVQSLEELPRIMAEAFDVACSG
Query Conservation 
  
  
  .........   


 
 
       
    
  
        . 
              
  
   
   
Alig confidence 








.........

















.














.





















.....
Template Conservation   


    
              
      
    
. 



  
 
 
  


  
  

   
   

  
  .....
Template Sequence  FDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGCVGHG. ALYHSQSPEAFFAHCPGIKVVIPRSPFQAKGLLLSCIE. . . . .
Template Known Secondary structure  TTGGGTTSS

TTS

SS
.GGGSS


T
TT


SS.....
Template Predicted Secondary structure 














.












.....
Template SS confidence 















































































   107..110.........120.........130.........140.. .......150.........160.........170.........180
 
   149150.........160.........170.........180.........190.........200.........210.........220........
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  RPGPVLVDIPKDIQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALREFLAATKMPAT
Query Conservation    


 
 

 
                         
      
  

 



 
 
     
   
  


    

 
Alig confidence 

































..........



































Template Conservation     
  

  
 
                 
   ..........
 
 
 

 


 
  
  

 

  
 
  

   
Template Sequence  DKNPCIFFEPKILYRAAAEEVPIEPYNIPLSQAE. . . . . . . . . . VIQEGSDVTLVAWGTQVHVIREVASMAKEKLGVSCE
Template Known Secondary structure  SSS
GGGSSS

SS




TT

..........

SS
TT


Template Predicted Secondary structure 























..........








Template SS confidence 















































































   181........190.........200.........210.... .....220.........230.........240.........250
 
   229230.........240.........250.........260.........
Predicted Secondary structure 























Query SS confidence 








































Query Sequence  CTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAV
Query Conservation   
   
       
   
  
          
  

 

 
Alig confidence 
.............


























Template Conservation 
.............

   
 
 
 
 
      
  



Template Sequence  V. . . . . . . . . . . . . IDLRTIIPWDVDTICKSVIKTGRLLIS
Template Known Secondary structure  .............

S



Template Predicted Secondary structure  .............






Template SS confidence 








































   251 ........260.........270........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions