Job Description P0ADA3 Confidence 100.00% Date Thu Jan 5 11:20:26 GMT 2012 Rank 3 Aligned Residues 196 % Identity 25% Template d1qwya_ SCOP info Barrel-sandwich hybrid Duplicated hybrid motif Peptidoglycan hydrolase LytM Resolution 1.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	D	A	A	E	Q	G	V	V	I	K	P	A	Q	N	S	T	V	A	V	A	S	Q	P	T	I	T	Y	S	E	S	S	G	E	Q	S	A	N	K	M	L	P	N	N	K	P	T	A	T	T	V	T	A	P	V	T	V	P	T	A	S	T	T	E	P	T	V	S	S	T	S	T	S	T	P	I	S	T	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	E	Y	S	Y	T	F	V	D	A	Q	G	H	T	H	Y	F	Y	N	C	Y	P	K	N	A	N	A	N	G	S	G	Q	T	Y	V	N	P	A	T	A	G	D	N	N	D	Y	T	A	S	Q	S	Q	Q	H	I	N	Q	Y	G	Y	Q	S	N	V	G	P	D	A	S	Y	Y	S	S	G	H	A	K	D	A
Template Known Secondary structure		T	T									T	T	S						S	S				S	S		S	S								S			S	S	T	T																					S	S					G	G	G	T						S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure																				.	.																														.	.
Query SS confidence																				.	.																														.	.
Query Sequence		R	W	P	T	E	G	K	V	I	E	T	F	G	A	S	E	G	G	.	.	N	K	G	I	D	I	A	G	S	K	G	Q	A	I	I	A	T	A	D	G	R	V	V	Y	A	G	N	A	L	.	.	R	G	Y	G	N	L	I	I	I	K	H	N	D	D	Y	L	S	A	Y	A	H	N	D	T	M	L	V	R	E
Query Conservation																				.	.																														.	.
Alig confidence																				.	.																														.	.																.
Template Conservation																																																																				.
Template Sequence		S	W	L	T	S	R	K	Q	L	Q	P	Y	G	Q	Y	H	G	G	G	A	H	Y	G	V	D	Y	A	M	P	E	N	S	P	V	Y	S	L	T	D	G	T	V	V	Q	A	G	W	S	N	Y	G	G	G	N	Q	V	T	I	K	E	A	N	S	N	N	Y	.	Q	W	Y	M	H	N	N	R	L	T	V	S	A
Template Known Secondary structure						T	S						S				T	T	S	S				S							T	T						S	S	S										T	T	T	T									T	T	S	S			.							S						T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.					.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure																						.												.	.	.	.
Query SS confidence																						.												.	.	.	.
Query Sequence		Q	Q	E	V	K	A	G	Q	K	I	A	T	M	G	S	T	G	T	S	S	.	T	R	L	H	F	E	I	R	Y	K	G	.	.	.	.	K	S	V	N	P	L	R	Y	L	P
Query Conservation																						.												.	.	.	.
Alig confidence																						.												.	.	.	.
Template Conservation
Template Sequence		G	D	K	V	K	A	G	D	Q	I	A	Y	S	G	S	T	G	N	S	T	A	P	H	V	H	F	Q	R	M	S	G	G	I	G	N	Q	Y	A	V	D	P	T	S	Y	L	Q
Template Known Secondary structure		T					T	T										S	S		S	S	S									S			S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions