 |
Job Description | P0ADA3 | Confidence | 34.03% | Date | Thu Jan 5 11:20:26 GMT 2012 |
Rank | 107 | Aligned Residues | 52 |
% Identity | 23% | Template | d1ee8a2 |
SCOP info | N-terminal domain of MutM-like DNA repair proteins
| N-terminal domain of MutM-like DNA repair proteins
| N-terminal domain of MutM-like DNA repair proteins
|
Resolution | 1.90 |
|
 |
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | |
|
|
|
. | . | . | . | . | 360 | . | . | . | . | . | . | . | . | |
|
|
. | 370 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|  | . | . | . |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
Query Sequence |   |
R | V | V | Y | A | G | N | A | L | R | G | Y | G | N | L | I | I | I | K | H | N | D | D | Y | L | S | A | Y | A | H | N | D | T | M | L | V | R | E | Q | Q | E | V | K | A | G | Q | K | I | A | T | M | G | S | T | G | T | . |
. |
. |
. |
S | S | T | R | L | H | F | E | I | R | Y | K | G | K | . |
. |
. |
S | V | N |
Query Conservation |   |
  |
|   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |
|   |
|   |   |
|   |   |
|   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|   |
|
|   | . | . | . | . |
|
|
|
|
|
|
|
|
|   |   |   |
|   | . | . | . |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
| . | . | . | . |
|
|   |
|   |   |   |
|   |   |   |   | . |   |
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
Template Sequence |   |
R | I | L | E | V | D | R | R | . |
. |
. |
. |
G | K | F | L | L | F | A | L | E | G | G | V | . |
E | L | V | A | H | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | M | T | G | G | F | R | L | E | P | T | P | H | T | R | A | A | L | V | L | E | G | R | T | L | Y | F | H | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . | T | T |  |  |  |  |  |  | T | T | T |  | . |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T |
|  |  |  | S | S |
|
| T | T |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . | . |
|  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
43 | . | . | . | . | . | . | 50 | |
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | |
. | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
  |   |
372 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
P | L | R | Y |
Query Conservation |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |
|   |
|
Template Sequence |   |
P | R | R | F |
Template Known Secondary structure |   |
T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
Template SS confidence |   |
|
|
|
|
  |   |
98 | . | 100 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|