Job Description P0ADA3 Confidence 62.36% Date Thu Jan 5 11:20:26 GMT 2012 Rank 84 Aligned Residues 42 % Identity 19% Template c3trzE_ PDB info PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element Resolution 2.90 Å

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		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.						.	320	.	.	.	.	.	.	.	.	.	330	.	.	.							.	.	.	.	.	.	340	.
Predicted Secondary structure																							.	.	.	.	.																.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																.	.	.	.	.	.
Query Sequence		G	R	V	V	Y	A	G	N	A	L	R	G	Y	G	N	L	I	I	I	K	H	.	.	.	.	.	N	D	D	Y	L	S	A	Y	A	H	N	D	T	M	L	.	.	.	.	.	.	V	R	E	Q	Q	E	V	K
Query Conservation																							.	.	.	.	.																.	.	.	.	.	.
Alig confidence								.								.							.	.	.	.	.																.	.	.	.	.	.
Template Conservation								.								.
Template Sequence		G	I	C	K	W	F	.	N	V	R	M	G	F	G	.	F	L	S	M	T	A	R	A	G	V	A	L	D	P	P	V	D	V	F	V	H	Q	S	K	L	H	M	E	G	F	R	S	L	K	E	G	E	A	V	E
Template Known Secondary structure								.		T	T	T	T			.								T	T													G	G	G	B			S	S	S					T	T
Template Predicted Secondary structure								.								.
Template SS confidence
		42	.	.	.	.	.		.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions