Job Description P45769 Confidence 97.71% Date Thu Jan 5 12:03:44 GMT 2012 Rank 118 Aligned Residues 157 % Identity 10% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	P	G	E	R	I	V	L	C	G	P	S	G	S	G	K	S	T	T	I	R	C	I	N	H	L	E	E	H	Q	Q	G	R	I	V	V	D	G	I	E	L	N	E	D	I	R	N	I	E	R	V	R	Q	E	V	G	M	V	F	Q	H	F	N	L	F	P	H	L	T	V	L	Q	N	C	T	L	A	P	I
Query Conservation
Alig confidence																																													.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		Y	K	R	R	N	F	V	L	I	A	A	R	P	S	M	G	K	T	A	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	.	.	.	.	K	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	.	.	.	.	.	.	.	.	A	Q	K	I	K	A	A	R	R
Template Known Secondary structure		B		S	S									S	S	S	S															T	T								S	S	S		.	.	.	.													S				.	.	.	.	.	.	.	.						T	T	G	G
Template Predicted Secondary structure																																													.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.					.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250									.	.	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.								.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.
Query Sequence		W	V	R	K	M	P	K	K	E	A	E	D	L	A	V	H	Y	L	E	R	V	R	I	A	E	H	A	H	K	F	P	G	Q	I	S	G	G	Q	Q	Q	R	V	A	I	A	R	S	L	C	M	K	P	K	I	M	L	F	D	E	.	.	.	.	.	.	.	P	T	S	A	L	D	P	E	M	V	K	E	V	L
Query Conservation																																																													.	.	.	.	.	.	.
Alig confidence																			.							.																																			.	.	.	.	.	.	.
Template Conservation																			.							.
Template Sequence		D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	.	S	N	S	N	I	N	.	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M	I	D	Y	L	Q	L	L	E	P	A	K	A	N	D	S	R	T	N	Q	I	S	Q	I	S
Template Known Secondary structure		G	T			S													.		T	S				.					S	S		B															S		S	S									S	S	S	S	B		S		S	S	S
Template Predicted Secondary structure																			.							.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		188	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	T	M	I	G	L	A	Q	S	.	G	M	T	M	L	C	V	T	H
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		R	D	L	K	K	M	A	R	E	L	D	V	V	V	I	A	L	S	Q
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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