Return to main results Retrieve Phyre Job Id

Job DescriptionP45769
Confidence99.88%DateThu Jan 5 12:03:44 GMT 2012
Rank63Aligned Residues160
% Identity17%Templatec2j41A_
PDB info PDB header:transferaseChain: A: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of staphylococcus aureus guanylate2 monophosphate kinase
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  QPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPIW
Query Conservation    

   
 
 









 
 
      
 
   
             
  
  
 
   
    

 


      
Alig confidence 










































.....































Template Conservation   

    
 
 







   
                    .....      
         
               
Template Sequence  EKGLLIVLSGPSGVGKGTVRKRIFEDPSTSYKYSISMTTRQMR. . . . . EGEVDGVDYFFKTRDAFEALIKDDQFIEYAEY
Template Known Secondary structure 




STTS

TT






S


.....TT

BTTTB

TT
Template Predicted Secondary structure 























.....



Template SS confidence 















































































   4.....10.........20.........30.........40...... ...50.........60.........70........
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  VRKMPKKEAEDLAVHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQ
Query Conservation                  
    
          

 
 
 

 

 

   
 







 


      
   
     
Alig confidence 










..........










































..............

Template Conservation             ..........           

 
          
   
  
 




  

..............  
Template Sequence  VGNYYGTPVQY. . . . . . . . . . VKDTMDEGHDVFLEIEVEGAKQVRKKFPDALFIFLAPPSKEVE. . . . . . . . . . . . . . MM
Template Known Secondary structure  TT..........TT


GGG
TTS



GGG..............GG
Template Predicted Secondary structure 





..........











..............
Template SS confidence 















































































   7980......... 90.........100.........110.........120.........130.. ..
 
   196...200.........210.........220....
Predicted Secondary structure 








Query SS confidence 




























Query Sequence  SGMTMLCVTHEMGFARTVADRVIFMDRGE
Query Conservation   
 


  

         
 
 

  
 
Alig confidence 




























Template Conservation        

   
  
      

      
Template Sequence  NLYDYVVVNDEVELAKNRIQCIVEAEHLK
Template Known Secondary structure  GG
S
SST
Template Predicted Secondary structure 







Template SS confidence 




























   162.......170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions