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Job DescriptionP45769
Confidence100.00%DateThu Jan 5 12:03:44 GMT 2012
Rank14Aligned Residues240
% Identity34%Templatec2d62A_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:multiple sugar-binding transport atp-binding PDBTitle: crystal structure of multiple sugar binding transport atp-2 binding protein
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   910.........20.........30.........40.........50.........60.........70........ .80......
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Query Sequence  ANAMITLENVNKWYGQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNE. . DIRNIERV
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Template Sequence  GXAEVKLINIWKRFGDVTAVKDLSLEIKDGEFLVLLGPSGCGKTTTLRXIAGLEEPTRGQIYIEDNLVADPEKGVFVPPK
Template Known Secondary structure  S

STT
TT

STTSSTSS

STTGGGT

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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  RQEVGMVFQHFNLFPHLTVLQNCTLAPIWVRKMPKKEAEDLAVHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKP
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Template Sequence  ERDVAXVFQSYALYPHXTVYDNIAFP. LKLRKVPKQEIDKRVREVAEXLGLTELLNRKPRELSGGQRQRVALGRAIIRRP
Template Known Secondary structure  T


S



TTS
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TT
GGGTT

GGGS
SS

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   83......90.........100........ .110.........120.........130.........140.........150.........160.
 
   167..170.........180.........190...... ...200.........210.........220.........230.........240.....
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Query Sequence  KIMLFDEPTSALDPEMVKEVLDTMIGLAQS. GMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHPKSERTRA
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Template Sequence  KVFLXDEPLSNLDAKLRVKXRAELKKLQRQLGVTTIYVTHDQVEAXTXGDRIAVXNKGELQQVGTPDEVYYKPVNTFVAG
Template Known Secondary structure  SSTTTT

T
S

STT
S
SB
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   246...
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Query Sequence  FLSQ
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Template Sequence  FIGS
Template Known Secondary structure  SSS
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   242...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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