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Job DescriptionP45769
Confidence97.83%DateThu Jan 5 12:03:44 GMT 2012
Rank112Aligned Residues136
% Identity17%Templatec1xp8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s"
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  VQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPHLTVLQNCTLAPI
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Template Sequence  IPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALD. . . . PVYARALGVNTDELLVSQPDNGEQALEIMEL
Template Known Secondary structure  TTSSTTSSTT

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   68.70.........80.........90.........100.........110.. .......120.........130.........140...
 
   115....120.........130.........140.........150.........160.........170.. .......180......
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Query Sequence  WVRKMPKKEAEDLAVHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIMLFD. . . . . . . . EPTSALDPEMVKEV
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Template Sequence  LVRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GAIDVVVVDSVAALTPRAEIPGLQARLMSQA
Template Known Secondary structure  TT.............................................T

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   144... ..150.........160.........170........
 
   187..190...... ...200.........210.........
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Query Sequence  LDTMIGLAQS. GMTMLCVTHEMGFARTVADRVIF
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Template Sequence  LRKLTAILSKTGTAAIFINQVGGRALKFYASVRL
Template Known Secondary structure  TTT




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   187..190.........200.........210.........220
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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