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Job DescriptionP45769
Confidence100.00%DateThu Jan 5 12:03:44 GMT 2012
Rank8Aligned Residues237
% Identity32%Templatec1oxtB_
PDB info PDB header:transport proteinChain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.. .......30.........40.........50.........60.........70........ .80.........
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Query Sequence  ITLENVNKWY. . GQFHVLKNINLTVQPGERIVLCGPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNE. DIRNIERVRQE
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Template Sequence  IIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRK
Template Known Secondary structure  GGGT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   90.........100.........110.........120.........130.........140.........150.........160.........
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Query Sequence  VGMVFQHFNLFPHLTVLQNCTLAPIWVRKMPKKEAEDLAVHYLERVRIAEHAHKFPGQISGGQQQRVAIARSLCMKPKIM
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Template Sequence  IGMVFQTWALYPNLTAFENIAFP. LTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGGQQQRVALARALVKDPSLL
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GG.GTTSS

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   84.....90.........100...... ...110.........120.........130.........140.........150.........160..
 
   170.........180.........190...... ...200.........210.........220.........230.........240........
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Query Sequence  LFDEPTSALDPEMVKEVLDTMIGLAQS. GMTMLCVTHEMGFARTVADRVIFMDRGEIVEQAAPDEFFAHPKSERTRAFLS
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Template Sequence  LLDEPFSNLDARMRDSARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSIQVASLIG
Template Known Secondary structure  SSSSSS


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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   249250
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Query Sequence  QV
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Template Sequence  EI
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   243.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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