|   |
1 | . | . | . | . | . | . | . | . | 10 | |
|
|
|
. | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | L | S | L | S | P | P | P | Y | . |
. |
. |
. |
A | D | A | P | V | V | V | L | I | S | G | L | G | . |
. |
. |
. |
. |
G | S | G | S | Y | W | L | P | Q | L | A | V | L | E | Q | E | Y | Q | V | V | C | Y | D | Q | R | . |
. |
. |
. |
. |
. |
. |
G | T | G | N | N | P | D | T | L | A | E | D | Y | S | I | A |
Query Conservation |   |
|
|
|   |
|   |   |   |   |   | . | . | . | . |
|   |
|
|   |
|
|
|
|
|
|   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |   | . | . | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
Template Sequence |   |
L | F | I | N | V | F | K | P | S | T | A | T | S | Q | S | K | L | P | V | W | L | F | I | Q | G | G | G | Y | A | E | N | S | N | A | N | Y | N | G | T | Q | V | I | Q | A | S | D | D | V | I | V | F | V | T | F | N | Y | R | V | G | A | L | G | F | L | A | S | E | K | V | R | Q | N | G | D | L | N | A | G | L | L |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  | T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |
|
| S | T | T | T | S |
|
| S |
| S |
|
|
|  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  | S | S |
| T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
  |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | |
|
|
|
. | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | M | A | A | E | L | H | Q | A | L | V | A | A | . |
. |
. |
. |
. |
G | I | E | H | Y | A | V | V | G | H | A | L | G | A | L | V | G | M | Q | L | A | L | D | Y | . |
. |
. |
. |
P | A | S | V | T | V | L | I | S | V | N | G | W | L | R | I | N | A | H | T | R | R | C | F | Q | V | R | E | R | L | L | Y | S | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |
|
|
|   |
|   |
|
|
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | Q | R | K | A | L | R | W | V | K | Q | Y | I | E | Q | F | G | G | D | P | D | H | I | V | I | H | G | V | S | A | G | A | G | S | V | A | Y | H | L | S | A | Y | G | G | K | D | E | G | L | F | I | G | A | I | V | E | S | S | F | W | P | T | Q | R | T | V | S | E | M | E | F | Q | F | E | R | F | V | N | D | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T | G | G | G | T |
|
|
| S | S |
| S |  |  |  |  |  | S |
|
|
|
|
|
|
|
| S | G | G | G |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
182 | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
  |
  |   |
136 | . |
Predicted Secondary structure |   |
|  |
Query SS confidence |   |
|
|
Query Sequence |   |
G | A |
Query Conservation |   |
  |   |
Alig confidence |   |
|
|
Template Conservation |   |
|
|
Template Sequence |   |
G | C |
Template Known Secondary structure |   |
T |
|
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
262 | . |
  |