Phyre 2 alignment of P75895 with d1hlga

Job Description P75895
Confidence 100.00% Date Thu Jan 5 12:15:46 GMT 2012

Rank 78 Aligned Residues 259

% Identity 16% Template d1hlga_

SCOP info alpha/beta-Hydrolases alpha/beta-Hydrolases Gastric lipase

Resolution 3.00

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																													.	.	.	.	.	.									.																										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.									.																										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	K	L	S	L	S	P	P	P	Y	A	D	A	P	V	V	V	L	I	S	G	L	G	G	S	G	S	Y	W	.	.	.	.	.	.	L	P	Q	L	A	V	L	E	.	Q	E	Y	Q	V	V	C	Y	D	Q	R	G	T	G	N	N	P	D	T	L	A	E	D	Y	S	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.									.																										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.									.																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	R	I	P	Y	G	K	K	N	S	G	Q	R	P	V	V	F	L	Q	H	G	L	L	A	S	A	T	N	W	I	S	N	L	P	N	N	S	L	A	F	I	L	A	D	A	G	Y	D	V	W	L	G	N	S	R	G	N	T	W	A	R	R	N	L	Y	Y	S	P	D	S	V	E	F	W	A	F	S	F	D	E	M
Template Known Secondary structure				S		S	S	T	T												T	T			G	G	G	G	G	S	S		T	T	S									T	T									T	T	S	T	T				B	S	S	S		T	T	S	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
	44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure	.
Query SS confidence	.
Query Sequence	.	I	A	Q	M	A	A	E	L	H	Q	A	L	V	A	A	G	I	E	H	Y	A	V	V	G	H	A	L	G	A	L	V	G	M	Q	L	A	L	D	Y	P	A	S	V	T	V	L	I	S	V	N	G	W	L	R	I	N	A	H	T	R	R	C	F	Q	V	R	E	R	L	L	Y	S	G	G	A	Q	A	W	V
Query Conservation	.
Alig confidence	.
Template Conservation
Template Sequence	A	K	Y	D	L	P	A	T	I	D	F	I	V	K	K	T	G	Q	K	Q	L	H	Y	V	G	H	S	Q	G	T	T	I	G	F	I	A	F	S	T	N	P	S	L	A	K	R	I	K	T	F	Y	A	L	A	P	V	A	T	V	K	Y	T	K	S	L	I	N	K	L	R	F	V	P	Q	S	L	F	K	F	I
Template Known Secondary structure			T																S								T																		T	T								S			S			S	S			S	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
	127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

	142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	E	A	Q	P	L	F	L	Y	P	A	D	W	M	A	A	R	A	P	R	L	E	A	E	D	A	L	A	L	A	H	F	Q	G	K	N	N	L	L	R	R	L	N	A	L	K	R	A	D	F	S	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	F	G	D	K	I	F	Y	P	H	N	F	F	D	Q	F	L	A	T	E	V	C	S	R	E	M	L	N	L	L	C	S	N	A	L	F	I	I	C	G	F	D	S	K	N	F	N	T	S	R	L	D	V	Y	L	S	H	N	P	A	G	T	S	V	Q	N	M	F	H	W	T	Q	A	V	K	S	G	K	F	Q	A
Template Known Secondary structure			S	S	B				T	T	T	T	T	T	S										S						T												T	T	S		G	G	G						T	T			S			B															S		B
Template Predicted Secondary structure
Template SS confidence
	207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

																							194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.
Predicted Secondary structure	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																.	.	.
Query SS confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																.	.	.
Query Sequence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	R	I	R	C	P	V	Q	I	I	C	A	S	D	D	L	L	V	P	T	A	C	S	S	E	L	H	A	A	L	P	D	.	S	Q	K	M	V	M	P	Y	G	G	H	A	C	N	V	.	.	.	T	D	P	E	T	F
Query Conservation	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.																.	.	.
Template Conservation
Template Sequence	Y	D	W	G	S	P	V	Q	N	R	M	H	Y	D	Q	S	Q	P	P	Y	Y	N	V	T	A	M	N	V	P	I	A	V	W	N	G	G	K	D	L	L	A	D	P	Q	D	V	G	L	L	L	P	K	L	P	N	L	I	Y	H	K	E	I	P	F	Y	N	H	L	D	F	I	W	A	M	D	A	P	Q	E	V
Template Known Secondary structure				S	S									S	S	S	S			B			G	G	G			S								T	T		S	S	S													T	T								T	T			T	T						T	T					T
Template Predicted Secondary structure
Template SS confidence
	287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

	248	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure
Query SS confidence
Query Sequence	N	A	L	L	L	N	G	L	A	S	L	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Y	N	D	I	V	S	M	I	S	E	D	K	K
Template Known Secondary structure									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
	367	.	.	370	.	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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