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Job DescriptionP75895
Confidence99.97%DateThu Jan 5 12:15:46 GMT 2012
Rank81Aligned Residues251
% Identity17%Templatec3qitB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:polyketide synthase; PDBTitle: thioesterase domain from curacin biosynthetic pathway
Resolution1.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30....... ..40.........50.... .....60.........70.........
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Query Sequence  KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLE. QEYQVVCYDQRGTGNNP. DTLAEDYSIAQMAAELHQALVAAGI
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Template Sequence  QICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYSSLTFLAQIDRVIQELPD
Template Known Secondary structure  S
TTS


TT

GGGGTT


TTSTTS


SSGGG
SS
S
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   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  EHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP
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Template Sequence  QPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQLTTCLDYLSSTPQHPIFPDVATAASRLRQAI
Template Known Secondary structure  S
T
GGGS








S

T






BSSS
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   160.........170.. .......180.........190.........200.........210.........220...
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Query Sequence  RLEAEDALALAHF. . . . . . . . . . . . . . . . QGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAA
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Template Sequence  PSLSEEFSYILAQRITQPNQGGVRWSWDAIIRTILGLNNLPGGRSQYLEMLKSIQVPTTLVYGDSSKLNRPEDLQQQKMT
Template Known Secondary structure  TTS
TTT
S
GGG




TTS
TT


S
TT

SS
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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   224.....230.........240.........250...
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Query Sequence  LPDSQKMVMPYGGHACNVTDPETFNALLLN
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Template Sequence  MTQAKRVFLSG. GHNLHIDAAAALASLILT
Template Known Secondary structure 
TT
SS.SS
TT
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   254.....260.... .....270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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