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Job DescriptionP75895
Confidence99.82%DateThu Jan 5 12:15:46 GMT 2012
Rank132Aligned Residues225
% Identity16%Templatec3k2iA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:acyl-coenzyme a thioesterase 4; PDBTitle: human acyl-coenzyme a thioesterase 4
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30........ .40.........50.........60.........70......... 80.
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Query Sequence  LSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQ. EYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGI. . EH
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Template Sequence  FLPPGPGPFPGIIDIFGIGGGLLEYR. . ASLLAGHGFATLALAYYNFEDLPNNMDNI. SLEYFEEAVCYMLQHPQVKGPG
Template Known Secondary structure 
SSS

B


TT
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..TTT

SSSTTS
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   149150.........160.........170.... .....180.........190.........200... ......210.........220.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  YAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRL
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Template Sequence  IGLLGISLGADICLSMASFLK. NVSATVSINGSGISGN. . . . . . . . . . . . . . . . . . . . . . . . . . TAINYKHSSIPPLGYD
Template Known Secondary structure  T
S.SS

SB

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   226...230.........240...... ...250.........260.. .......270........
 
   162.......170.........180.........190.........200.........210..... ....220.... .....230.....
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Query Sequence  EAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTA. CSSELHAAL. . . . . PDSQKMVMPYG
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Template Sequence  LRRIKVAFSGLVDIVDIRNALVGGYKNPSMIPIEKAQGPILLIVGQDDHNWRSELYAQTVSERLQAHGKEKPQIICYPGT
Template Known Secondary structure  GGG

TTS

TT
B


TTGGGSTTB

GGG

S
TT
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TT
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   279280.........290.........300.........310.........320.........330.........340.........350........
 
   236... 240.........250.........
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Query Sequence  GHAC. . . . . . . . . . . . . . . . . . . . . . . . . . . . NVTDPETFNALLLNGLASLL
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Template Sequence  GHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHL
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   359360.........370.........380.........390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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