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Job DescriptionP75895
Confidence99.95%DateThu Jan 5 12:15:46 GMT 2012
Rank93Aligned Residues250
% Identity10%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  LSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHY
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Template Sequence  VVLQGLPMVARKTLFMLPDGGGSAFSYASL. PRLKSDTAVVGLNCPYARDPENMNCTH. . GAMIESFCNEIRRRQPRGPY
Template Known Secondary structure  S
TTTSS

TT

GGGGTTS.


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GGG



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   1855....1860.........1870.........1880.... .....1890.........1900.........1910. ........1920.........1930.
 
   83......90......... 100.........110.........120.........130.........140.........150.........
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Query Sequence  AVVGHALGALVGMQLAL. . . DYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAP
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Template Sequence  HLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHFT
Template Known Secondary structure  TTT

S

SS






TTTTTTSSSS
SSS
S


TT
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   1932.......1940.........1950.........1960.........1970.........1980.........1990.........2000.........2010.
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  RLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHAC
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Template Sequence  AVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMPG. ASFDIVRADGANHFT
Template Known Secondary structure  TTT







SS


SS
TTTS


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TTTS




S
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   2012.......2020.........2030.........2040.........2050.........2060.........2070..... ....2080.........2090
 
   240.... .....250......
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Query Sequence  NVTDP. . ETFNALLLNGLA
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Template Sequence  LMQKEHVSIISDLIDRVMA
Template Known Secondary structure  GGSTTTTT
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   2091........2100.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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