Job Description P75895 Confidence 99.90% Date Thu Jan 5 12:15:46 GMT 2012 Rank 119 Aligned Residues 179 % Identity 17% Template c2qs9A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:retinoblastoma-binding protein 9; PDBTitle: crystal structure of the human retinoblastoma-binding2 protein 9 (rbbp-9). nesg target hr2978 Resolution 1.72 Å

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		14	.		.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.			.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure				.														.	.	.	.											.	.
Query SS confidence				.														.	.	.	.											.	.
Query Sequence		P	V	.	V	V	L	I	S	G	L	G	G	S	G	S	Y	.	.	.	.	W	L	P	Q	L	A	V	L	E	Q	.	.	E	Y	Q	V	V	C	Y	D	Q	R	G	T	G	N	N	P	D	T	L	A	E	D	Y	S	I	A	Q	M	A	A	E	L	H	Q	A	L	V	A	A	G	I	E	H	Y	A	V	V	G
Query Conservation				.														.	.	.	.											.	.
Alig confidence				.														.	.	.	.											.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	K	A	V	I	V	P	G	N	G	G	G	D	V	T	T	H	G	W	Y	G	W	V	K	K	E	L	E	K	I	P	G	F	Q	C	L	A	K	N	X	P	D	P	I	T	A	R	.	.	.	.	.	.	.	.	.	.	E	S	I	W	L	P	F	X	E	T	E	L	H	C	D	E	K	T	I	I	I	G
Template Known Secondary structure											S	S	S	S		T	T	T	S	T	T									T	T	S	T	T									S	S	T	T	T			.	.	.	.	.	.	.	.	.	.											T	S				T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.											.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	L	G	A	L	V	G	M	Q	L	A	L	D	Y	P	A	S	V	T	V	L	I	S	V	N	G	W	L	R	I	N	A	H	T	R	R	C	F	Q	V	R	E	R	L	L	Y	S	G	G	A	Q	A	W	V	E	A	Q	P	L	F	L	Y	P	A	D	W	M	A	A	R	A	P	R	L	E	A	E	D	A
Query Conservation
Alig confidence																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	S	G	A	I	A	A	X	R	Y	A	E	T	H	R	.	.	V	Y	A	I	V	L	V	S	A	Y	T	S	D	L	G	D	E	N	E	R	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T													S		.	.		S						S			S	S		T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	A	H	F	Q	G	K	N	N	L	L	R	R	L	N	A	L	K	R	A	D	F	S	H	H	A	D	R	I	R	C	P	V	Q	I	I	C	A	S	D	D	L	L	V	P	T	A	C	S	S	E	L	H	A	A	L	P	D	S	Q	K	M	V	M	P	Y	G	G	H	A	C	N	V	T	D	P	E	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	F	T	R	P	W	Q	W	E	K	I	K	A	N	C	P	Y	I	V	Q	F	G	S	T	D	D	P	F	L	P	W	K	E	Q	Q	E	V	A	D	R	L	.	E	T	K	L	H	K	F	T	D	C	G	H	F	Q	N	T	E	F	H	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T	S	S												S								T	T		S	S	S													.	T							S	S		T	T	S		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template SS confidence
																		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.		.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		247	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		F	N	A	L	L	L	N	G	L	A	.	S	L	L	H	H	R
Query Conservation												.
Alig confidence			.									.
Template Conservation			.
Template Sequence		I	.	T	V	V	K	S	L	L	K	V	P	A	L	E	H	H
Template Known Secondary structure			.								T
Template Predicted Secondary structure			.
Template SS confidence
		175		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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