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Job DescriptionP75895
Confidence99.60%DateThu Jan 5 12:15:46 GMT 2012
Rank170Aligned Residues214
% Identity15%Templatec1xfdD_
PDB info PDB header:membrane proteinChain: D: PDB Molecule:dipeptidyl aminopeptidase-like protein 6; PDBTitle: structure of a human a-type potassium channel accelerating factor2 dppx, a member of the dipeptidyl aminopeptidase family
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKLSLSPPP. . . . YADAPVVVLISGLG. . . . . GSGSYWLPQLAVLEQ. EYQVVCYDQRGTGNN. . . . . . . PDTLAEDYSI
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Template Sequence  LPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLLHEVRRRLGLLEE
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   606...610.........620.........630.........640.........650.........660.........670.........680.....
 
   64.....70...... ...80.........90.........100 .........110.........120.........130.......
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Query Sequence  AQMAAELHQALVA. . AGIEHYAVVGHALGALVGMQLALD. . . . YPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGA
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Template Sequence  KDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNR
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   686...690.........700.........710.........720.........730.........740.........750.........760.....
 
   138.140.........150.........160.........170.........180.........190........ .200.........210......
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Query Sequence  QAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIR. CPVQIICASDDLLVPTAC
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AYEMTKVAHRVSALEEQQFLIIHPTADEKIHFQH
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   766...770.........780.........790.........
 
   217..220..... ....230....... ..240.........250.........260
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Query Sequence  SSELHAALP. . . . DSQKMVMPYGGH. ACNVTDPETFNALLLNGLASLLH
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Template Sequence  TAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHLYRSIINFFVECFR
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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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