Job Description P75895 Confidence 56.48% Date Thu Jan 5 12:15:46 GMT 2012 Rank 286 Aligned Residues 98 % Identity 20% Template c1gxsC_ PDB info PDB header:lyase Chain: C: PDB Molecule:p-(s)-hydroxymandelonitrile lyase chain a; PDBTitle: crystal structure of hydroxynitrile lyase from sorghum2 bicolor in complex with inhibitor benzoic acid: a novel3 cyanogenic enzyme Resolution 2.3 Å

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		1	.	.	.	.	.	.	.				.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.												.	.	.								.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.			.	.
Predicted Secondary structure										.	.	.																					.						.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.													.						.	.
Query SS confidence										.	.	.																					.						.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.													.						.	.
Query Sequence		M	K	L	S	L	S	P	P	.	.	.	P	Y	A	D	A	P	V	V	V	L	I	S	G	L	G	G	S	G	S	Y	.	W	L	P	Q	L	.	.	.	.	.	.	.	.	.	.	.	A	V	L	.	.	.	.	.	.	.	E	Q	E	Y	Q	V	V	C	Y	D	Q	R	.	G	T	G	N	N	.	.	P	D
Query Conservation										.	.	.																					.						.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.													.						.	.
Alig confidence										.	.	.																					.						.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.													.						.	.
Template Conservation
Template Sequence		L	Y	Y	W	F	Q	E	A	D	T	A	D	P	A	A	A	P	L	V	L	W	L	N	G	G	P	G	C	S	S	I	G	L	G	A	M	Q	E	L	G	A	F	R	V	H	T	N	G	E	S	L	L	L	N	E	Y	A	W	N	K	A	A	N	I	L	F	A	E	S	P	A	G	V	G	F	S	Y	S	N	T
Template Known Secondary structure											S	S		G	G	G	S									T	T	T			T	T	T	T					T	S	S	S					T	T	S	S						T	T		G	G	G	T	S								S	T	T	S	T	T				S	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.								.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		T	L	A	E	D	Y	S	I	A	Q	M	A	A	E	L	H	Q	A	L	V	A	.	.	.	.	.	.	.	A	G	I	E	H	Y	A	V	V	G	H	A	L	G	A	L	V	G	M	Q	L	A	L	D
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.													.	.
Template Conservation																																										.	.
Template Sequence		S	S	D	L	S	M	G	D	D	K	M	A	Q	D	T	Y	T	F	L	V	K	W	F	E	R	F	P	H	Y	N	Y	R	E	F	Y	I	A	G	E	S	.	.	G	H	F	I	P	Q	L	S	Q	V
Template Known Secondary structure		G	G	G	G																						S	G	G	G	T	T								S		.	.	T	T
Template Predicted Secondary structure																																										.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions