Return to main results Retrieve Phyre Job Id

Job DescriptionP77293
Confidence39.77%DateThu Jan 5 12:27:17 GMT 2012
Rank63Aligned Residues117
% Identity11%Templatec3brkX_
PDB info PDB header:transferaseChain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50..... ....60.........70.........80
Predicted Secondary structure 

















.....









Query SS confidence 

















































. . . . .
























Query Sequence  VVPVFNEEEAIPIFYKTVREFEELKSYEVEIVFINDGSKDATESIINALA. . . . . VSDPLVVPLSFTRNFGKEPALFAGL
Query Conservation 


 



  
   
  
 
 
       










 
  
     .....               
   
 
   
Alig confidence 



















.....
























.....
























Template Conservation 



   
 

   
  
  ..... 

  
 

       
   
                 
      

  

    
Template Sequence  AVYFGGKARIIDFALSNALN. . . . . SGIRRIGVATQYKAHSLIRHLQRGWDFFRPERNESFDILPASWYEGTADAVYQNI
Template Known Secondary structure  GSTTTT.....TT


TT
S



GGGT







TT
Template Predicted Secondary structure 



.....

















Template SS confidence 















































































   37..40.........50...... ...60.........70.........80.........90.........100.........110.
 
   81.. ......90.........100.........110.........120.......
Predicted Secondary structure 
...



















Query SS confidence 


. . .











































Query Sequence  DHA. . . TGDAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDG
Query Conservation    
...  
 
   


       
             
 
         
Alig confidence 


...











































Template Conservation    
        

   
 
        
  
       
           
Template Sequence  DIIEPYAPEYXVILAGDHIYKXDYEYXLQQHVDSGADVTIGCLEVPRXEA
Template Known Secondary structure 

SSS

B
TTT
STTGG
Template Predicted Secondary structure 



















Template SS confidence 

















































   119120.........130.........140.........150.........160........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions