Job Description P77293 Confidence 99.97% Date Thu Jan 5 12:27:17 GMT 2012 Rank 3 Aligned Residues 197 % Identity 19% Template c2ffuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2 Resolution 1.64 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure														.																						.	.
Query SS confidence														.																						.	.
Query Sequence		K	I	S	L	V	V	P	V	F	N	E	E	.	E	A	I	P	I	F	Y	K	T	V	R	E	F	E	E	L	K	S	Y	E	V	.	.	E	I	V	F	I	N	D	G	S	K	D	A	T	E	S	I	I	N	A	L	A	V	S	D	P	L	V	V	P	L	S	F	T	R	N	F	G	K	E	P	A	L	F	A
Query Conservation														.																						.	.
Alig confidence														.						.	.	.														.	.																				.	.	.
Template Conservation																				.	.	.																																			.	.	.
Template Sequence		A	T	S	V	V	I	T	F	H	N	E	A	R	S	A	L	L	R	.	.	.	T	V	V	S	V	L	K	K	S	P	P	H	L	I	K	E	I	I	L	V	D	D	Y	S	N	D	P	E	D	G	A	L	L	G	.	.	.	K	I	E	K	V	R	V	L	R	N	D	R	R	E	G	L	M	R	S	R	V	R
Template Known Secondary structure										S	S									.	.	.									S		G	G	G										S		S		T					G	G	G	.	.	.	G	B	T	T							S	S
Template Predicted Secondary structure																				.	.	.																																			.	.	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																							.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	D	H	A	T	G	D	A	I	I	P	I	D	V	D	L	Q	D	P	I	E	V	I	P	H	L	I	E	K	W	Q	A	G	A	D	M	V	L	A	K	R	S	D	R	S	T	D	G	R	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K	T	A	E	W
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	D	A	A	Q	A	K	V	L	T	F	L	D	S	H	C	E	C	N	E	H	W	L	E	P	L	L	E	R	V	A	E	D	R	T	R	V	V	S	P	I	I	D	V	I	N	M	D	N	F	Q	Y	V	G	A	S	A	D	L	K	G	G	F	D	W	N	L	V	F	K	W	D	Y	M	T	P	E	Q	R
Template Known Secondary structure								S	S							S	S					T	T													T	T												T	T	T								S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.
Query Sequence		F	Y	K	L	H	N	K	I	S	N	P	K	I	E	E	N	V	G	D	F	R	L	M	S	R	D	V	V	E	N	I	K	L	M	P	E	.	.	.	.	.	.	.	R	N	L	F	M	K	G	I	L	S	W	V	G	G	K	T	D	I	V	E	Y	V	R	A	E	R	I	A	G	D	T	K
Query Conservation																																						.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	R	Q	G	N	P	V	A	P	I	K	T	P	M	I	A	G	G	L	F	V	M	D	K	F	Y	F	E	E	L	G	K	Y	D	M	M	M	D	V	W	G	G	E	N	L	E	I	S	F	R	V	W	Q	C	G	G	S	L	E	I	I	P	C	S	R	V	G	H	V	F	R	K	Q	H
Template Known Secondary structure				T	S	S		T	T	S					S	S			S	S	S											T	T				T	T			S	S	S	S												T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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