Job Description P77293 Confidence 99.97% Date Thu Jan 5 12:27:17 GMT 2012 Rank 4 Aligned Residues 200 % Identity 18% Template c2d7iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+ Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure														.																						.	.															.
Query SS confidence														.																						.	.															.
Query Sequence		K	I	S	L	V	V	P	V	F	N	E	E	.	E	A	I	P	I	F	Y	K	T	V	R	E	F	E	E	L	K	S	Y	E	V	.	.	E	I	V	F	I	N	D	G	S	K	D	A	T	E	.	S	I	I	N	A	L	A	V	S	D	P	L	V	V	P	L	S	F	T	R	N	F	G	K	E	P	A	L	F
Query Conservation														.																						.	.															.
Alig confidence														.						.	.	.														.	.															.
Template Conservation																				.	.	.
Template Sequence		N	T	S	I	I	I	P	F	H	N	E	G	W	S	S	L	L	R	.	.	.	T	V	H	S	V	L	N	R	S	P	P	E	L	V	A	E	I	V	L	V	D	D	F	S	D	R	E	H	L	K	K	P	L	E	D	Y	M	A	L	F	P	S	V	R	I	L	R	T	K	K	R	E	G	L	I	R	T	R	M
Template Known Secondary structure										S	S									.	.	.									S		G	G	G										S				G	G	G	T								T	T	S	T	T							S	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	D	H	A	T	G	D	A	I	I	P	I	D	V	D	L	Q	D	P	I	E	V	I	P	H	L	I	E	K	W	Q	A	G	A	D	M	V	L	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	D	R	S	T	D	G	R	L	K	R	K	T	A	E	W	F
Query Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	A	S	V	A	T	G	D	V	I	T	F	L	D	S	H	C	E	A	N	V	N	W	L	P	P	L	L	D	R	I	A	R	N	R	K	T	I	V	C	P	M	I	D	V	I	D	H	D	D	F	R	Y	E	T	Q	A	G	D	A	M	R	G	A	F	D	W	E	M	Y	Y	K	R	I	P	I	P	P	E
Template Known Secondary structure									S	S							S	S					T	T		S											T	T												T	T	T							T	T	S	S							T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.
Query Sequence		Y	K	L	H	N	K	I	S	N	P	K	I	E	E	N	V	G	D	F	R	L	M	S	R	D	V	V	E	N	I	K	L	M	P	E	.	.	.	.	.	.	.	R	N	L	F	M	K	G	I	L	S	W	V	G	G	K	T	D	I	V	E	Y	V	R	A	E	R	I	A	G	D	T	K
Query Conservation																																					.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	K	A	D	P	S	D	P	F	E	S	P	V	M	A	G	G	L	F	A	V	D	R	K	W	F	W	E	L	G	G	Y	D	P	G	L	E	I	W	G	G	E	Q	Y	E	I	S	F	K	V	W	M	C	G	G	R	M	E	D	I	P	C	S	R	V	G	H	I	Y	R	K	Y	V
Template Known Secondary structure		T			S	S	T	T	S					S	S			S	S	S											T	T	S	S		T	T			S	S	S	S												T	T																	S	S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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