Job Description P77293 Confidence 99.97% Date Thu Jan 5 12:27:17 GMT 2012 Rank 1 Aligned Residues 211 % Identity 18% Template c1xhbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 1; PDBTitle: the crystal structure of udp-galnac: polypeptide alpha-n-2 acetylgalactosaminyltransferase-t1 Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure														.																						.	.															.												.
Query SS confidence														.																						.	.															.												.
Query Sequence		K	I	S	L	V	V	P	V	F	N	E	E	.	E	A	I	P	I	F	Y	K	T	V	R	E	F	E	E	L	K	S	Y	E	V	.	.	E	I	V	F	I	N	D	G	S	K	D	A	T	E	.	S	I	I	N	A	L	A	V	S	D	P	.	L	V	V	P	L	S	F	T	R	N	F	G	K	E	P	A	L
Query Conservation														.																						.	.															.												.
Alig confidence														.						.	.	.														.	.															.												.
Template Conservation																				.	.	.
Template Sequence		T	T	S	V	V	I	V	F	H	N	E	A	W	S	T	L	L	R	.	.	.	T	V	H	S	V	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	Y	V	K	K	L	K	V	P	V	H	V	I	R	M	E	Q	R	S	G	L	I	R	A	R
Template Known Secondary structure										S	S									.	.	.								S	S		G	G	G										S				G	G	G	T									S	S	S	S								S	S
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																							.	.	130	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	A	G	L	D	H	A	T	G	D	A	I	I	P	I	D	V	D	L	Q	D	P	I	E	V	I	P	H	L	I	E	K	W	Q	A	G	A	D	M	V	L	A	K	R	S	D	R	S	T	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	K	R	K	T	A
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	G	A	A	V	S	R	G	Q	V	I	T	F	L	D	A	H	C	E	C	T	A	G	W	L	E	P	L	L	A	R	I	K	H	D	R	R	T	V	V	C	P	I	I	D	V	I	S	D	D	T	F	E	Y	M	A	G	S	D	M	T	Y	G	G	F	N	W	K	L	N	F	R	W	Y	P	V	P	Q	R
Template Known Secondary structure										S	S							S	S					T	T													T	T												S	S	S								T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.
Query Sequence		E	W	F	Y	K	L	H	N	K	I	S	N	P	K	I	E	E	N	V	G	D	F	R	L	M	S	R	D	V	V	E	N	I	K	L	M	P	E	.	.	.	.	.	.	.	R	N	L	F	M	K	G	I	L	S	W	V	G	G	K	T	D	I	V	E	Y	V	R	A	E	R	I	A	G	D	T	K	F	N	G
Query Conservation																																								.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	M	D	R	R	K	G	D	R	T	L	P	V	R	T	P	T	M	A	G	G	L	F	S	I	D	R	D	Y	F	Q	E	I	G	T	Y	D	A	G	M	D	I	W	G	G	E	N	L	E	I	S	F	R	I	W	Q	C	G	G	T	L	E	I	V	T	C	S	H	V	G	H	V	F	G	Q	I	I	N	K	N
Template Known Secondary structure						T	T	T		T	T	S					S	B			S	S	S											T	T	S			T	T	S		T	T					S									T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		208	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	L	W	N	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	R	L	A	E	V	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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