Return to main results Retrieve Phyre Job Id

Job DescriptionP67660
Confidence95.18%DateWed Jan 25 15:21:01 GMT 2012
Rank130Aligned Residues42
% Identity17%Templated2d1ha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10....... ..20.. .......30.........40.......
Predicted Secondary structure 


.
..



Query SS confidence 











.




. .
























Query Sequence  ALTLEALRVMDA. IDRRG. . SFAAAADELGRVPSALSYTMQKLEE
Query Conservation   
 
  
  
  .
    ..
 
 

  
 


 


  
  

 
Alig confidence 











.




..
























Template Conservation   

     


  
         


  
 

 



  
  
  
Template Sequence  KITDTDVAVLLKXVEIEKPITSEELADIFKLSKTTVENSLKKLIE
Template Known Secondary structure  T


S
T

Template Predicted Secondary structure 











Template SS confidence 












































   18.20.........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions