Job Description P67660 Confidence 95.83% Date Wed Jan 25 15:21:01 GMT 2012 Rank 115 Aligned Residues 82 % Identity 12% Template d1sfxa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like Resolution 1.55

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																			.	.																																							.	.	.
Query SS confidence																			.	.																																							.	.	.
Query Sequence		A	L	T	L	E	A	L	R	V	M	D	A	I	D	R	R	G	.	.	S	F	A	A	A	A	D	E	L	G	R	V	P	S	A	L	S	Y	T	M	Q	K	L	E	E	E	L	D	V	V	L	F	D	R	S	G	H	R	.	.	.	T	K	F	T	N	V	G	R	M	L	L	E	R	G	R	V	L	L	E	A
Query Conservation																			.	.																																							.	.	.
Alig confidence																			.	.																																							.	.	.
Template Conservation
Template Sequence		S	F	K	P	S	D	V	R	I	Y	S	L	L	L	E	R	G	G	X	R	V	S	E	I	A	R	E	L	D	L	S	A	R	F	V	R	D	R	L	K	V	L	L	K	R	G	F	V	R	R	E	I	V	E	K	G	W	V	G	Y	I	Y	S	A	E	K	P	E	K	V	L	K	E	F	K	S	S	I	L	G
Template Known Secondary structure																				B										T																T	T	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	L	T	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	E	R	I	E	K
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions