Job Description P67660 Confidence 99.59% Date Wed Jan 25 15:21:01 GMT 2012 Rank 32 Aligned Residues 196 % Identity 14% Template c3n6uA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:lysr type regulator of tsambcd; PDBTitle: effector binding domain of tsar in complex with its inducer p-2 toluenesulfonate Resolution 1.87 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		T	H	L	T	I	V	T	E	A	L	V	P	T	P	A	F	F	P	L	I	D	K	L	A	A	.	K	A	N	T	Q	L	A	I	I	T	E	V	L	A	G	A	W	E	R	L	E	Q	G	R	A	D	I	V	I	A	P	D	M	H	F	R	S	S	S	E	I	N	S	R	K	L	Y	T	L	M	N	V	Y	V
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		G	H	I	T	F	A	A	S	P	A	I	A	L	A	A	L	P	L	A	L	A	S	F	A	R	E	F	P	D	V	T	V	N	V	R	D	G	M	Y	P	A	V	S	P	Q	L	R	D	G	T	L	D	F	A	L	T	A	A	H	K	H	D	I	D	T	D	L	E	A	Q	P	L	Y	V	S	D	V	V	I	V
Template Known Secondary structure															T														T	T										T	T	T	T						T	T	S		S								G	G	G	S		T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.				.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																		.	.	.
Query SS confidence																																		.	.	.
Query Sequence		A	A	P	D	H	P	I	H	Q	E	P	E	P	L	S	E	V	T	R	V	K	Y	R	G	I	A	V	A	D	T	A	R	.	.	.	E	R	P	V	L	T	V	Q	L	L	D	K	Q	P	R	L	T	V	S	T	I	E	D	K	R	Q	A	L	L	A	G	L	G	V	A	T	M	P	Y	P	M	V	E	K	D
Query Conservation																																		.	.	.
Alig confidence												.																						.	.	.
Template Conservation												.
Template Sequence		G	Q	R	Q	H	P	M	A	N	A	.	T	R	L	A	E	L	Q	E	C	R	W	A	F	S	S	A	P	R	G	P	G	A	I	I	R	N	A	F	A	R	Y	G	L	P	E	P	K	L	G	L	V	C	E	S	F	L	A	L	P	G	V	V	A	H	S	D	L	L	T	T	M	P	R	T	L	Y	E	R	N
Template Known Secondary structure				T	T		T	T	T	T		.		S	G	G	G	G	T	T	S								T	T	S	T	T										T	T													T	T	T							T	S	S		B										S	S
Template Predicted Secondary structure												.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		253	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure														.																.
Query SS confidence														.																.
Query Sequence		I	A	E	G	R	L	R	V	V	S	P	E	.	S	T	S	E	I	D	I	I	M	A	W	R	R	D	S	.	M	G	E	A	K	S	W	C	L	R	E	I	P	K
Query Conservation														.																.
Alig confidence														.																.
Template Conservation
Template Sequence		A	F	K	D	Q	L	C	S	I	P	L	Q	D	A	L	P	N	P	T	I	Y	V	L	R	R	H	D	L	P	V	T	P	A	A	A	G	L	I	R	W	I	Q	H
Template Known Secondary structure		T	T	G	G	G								S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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