Job Description P67660 Confidence 24.03% Date Wed Jan 25 15:21:01 GMT 2012 Rank 394 Aligned Residues 183 % Identity 10% Template c3hv1A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:polar amino acid abc uptake transporter substrate PDBTitle: crystal structure of a polar amino acid abc uptake2 transporter substrate binding protein from streptococcus3 thermophilus Resolution 1.90 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		A	F	F	P	L	I	D	K	L	A	A	K	A	N	T	Q	L	A	I	I	T	E	V	L	A	G	A	W	E	R	L	E	Q	G	R	A	D	.	I	V	I	A	P	D	M	H	F	R	S	S	S	E	I	N	S	R	K	L	Y	T	L	M	N	V	Y	V	A	A	P	D	H	P	I	H	Q	E	P	E	P	L
Query Conservation																																							.
Alig confidence																																							.
Template Conservation
Template Sequence		F	D	I	D	L	A	N	A	V	F	K	L	Y	G	I	D	V	E	W	Q	A	I	D	W	D	X	K	E	T	E	L	K	N	G	T	I	D	L	I	W	N	G	Y	S	V	T	D	E	R	K	Q	S	A	D	F	T	E	P	Y	X	V	N	E	Q	V	L	V	T	K	K	S	S	G	I	D	S	V	A	G	X
Template Known Secondary structure													T	T	T										G	G	G								T	S		S				S	S		B							T	T																		G	G	G				S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.
Predicted Secondary structure																																																				.																				.	.	.
Query SS confidence																																																				.																				.	.	.
Query Sequence		S	E	V	T	R	V	K	Y	R	G	I	A	V	A	D	T	A	R	E	R	P	V	L	T	V	Q	L	L	D	K	Q	P	R	L	T	V	S	T	I	E	D	K	R	Q	A	L	L	A	G	L	.	G	V	A	T	M	P	Y	P	M	V	E	K	D	I	A	E	G	R	L	.	.	.	R	V	V	S	P	E	S
Query Conservation																																																				.																				.	.	.
Alig confidence																																																				.																				.	.	.
Template Conservation
Template Sequence		A	G	K	T	L	G	A	Q	A	G	S	S	G	Y	D	A	F	N	A	S	P	K	I	L	K	D	V	V	A	N	Q	K	V	V	Q	Y	S	T	F	T	Q	A	L	I	D	L	N	S	G	R	I	D	G	L	L	I	D	R	V	Y	A	N	Y	Y	L	E	K	S	G	V	L	D	Q	Y	N	V	X	P	A	G
Template Known Secondary structure		T	T							T	T											T	T	T	T	T	T	T	S	G	G	G						S	S											T	S		S																T	T		G	G	G							S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	E	I	D	I	I	M	A	W	R	R	D	S	M	G	E	A	K	S	W	C	L	R	E	I	P	K	L	F
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		Y	E	G	E	S	F	A	V	G	A	R	K	V	.	.	D	K	T	L	I	K	K	I	N	Q	G	F	E	T	L
Template Known Secondary structure		S											T	T	.	.
Template Predicted Secondary structure															.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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