Job Description P67660 Confidence 100.00% Date Wed Jan 25 15:21:01 GMT 2012 Rank 4 Aligned Residues 284 % Identity 20% Template c3hhgF_ PDB info PDB header:transcription regulator Chain: F: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga, a lysr-type transcriptional regulator from2 neisseria meningitidis. Resolution 3.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	L	E	A	L	R	V	M	D	A	I	D	R	R	G	S	F	A	A	A	A	D	E	L	G	R	V	P	S	A	L	S	Y	T	M	Q	K	L	E	E	E	L	D	V	V	L	F	D	R	S	G	H	R	T	K	F	T	N	V	G	R	M	L	L	E	R	G	R	V	L	L	E	A	A	D	K	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	N	S	E	E	L	T	V	F	V	Q	V	V	E	S	G	S	F	S	R	A	A	E	Q	L	A	M	A	N	S	A	V	S	R	I	V	K	R	L	E	E	K	L	G	V	N	L	L	N	R	T	T	R	Q	L	S	L	T	E	E	G	A	Q	Y	F	R	R	A	Q	R	I	L	Q	E	M	A	A	A	E
Template Known Secondary structure																	T	S	S	S					T	T	T	T																		T	S					T	T	S	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		T	D	A	E	A	L	A	R	G	W	E	T	H	L	T	I	V	T	E	A	L	V	P	T	P	A	F	F	P	L	I	D	K	L	A	A	.	K	A	N	T	Q	L	A	I	I	T	E	V	L	A	G	A	W	E	R	L	E	Q	G	R	A	D	I	V	I	A	P	D	M	H	F	R	S	S	S	E	I	N	S
Query Conservation																																						.
Alig confidence																																						.																													.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.
Template Sequence		T	E	M	L	A	V	H	E	I	P	Q	G	V	L	S	V	D	S	A	M	P	M	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	N	L	I	E	R	K	V	D	I	A	L	R	A	.	.	.	.	.	G	E	L	D	D	S	G	L	R	A
Template Known Secondary structure							T	T	S																		T												S	T	T									S	S	S					T	T	S	S	S						.	.	.	.	.		S				S	S
Template Predicted Secondary structure																																																																			.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		R	K	L	Y	T	L	M	N	V	Y	V	A	A	P	D	H	P	I	H	Q	E	P	E	P	L	S	E	V	T	R	V	K	Y	R	G	I	A	V	A	D	T	A	R	E	R	.	.	.	.	P	V	L	T	V	Q	L	L	D	K	Q	P	R	L	T	V	S	T	I	E	D	K	R	Q	A	L	L	A	G	L	G
Query Conservation																																															.	.	.	.
Alig confidence																									.																						.	.	.	.
Template Conservation																									.
Template Sequence		R	H	L	F	D	S	R	F	R	V	I	A	S	P	E	Y	L	A	K	H	G	T	P	.	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	G	C	G
Template Known Secondary structure																									.	S	S	G	G	G	G	G	T	S						S	S	T	T	G	G	G							S	S	S	S							S	S			S	S										T	T	S
Template Predicted Secondary structure																									.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																							.	.																			.
Query SS confidence																							.	.																			.
Query Sequence		V	A	T	M	P	Y	P	M	V	E	K	D	I	A	E	G	R	L	R	V	V	.	.	S	P	E	S	T	S	E	I	D	I	I	M	A	W	R	R	D	S	.	M	G	E	A	K	S	W	C	L	R	E	I	P	K	L	F
Query Conservation																							.	.																			.
Alig confidence																							.	.																			.
Template Conservation
Template Sequence		I	V	C	L	S	D	F	L	V	D	N	D	I	A	E	G	K	L	I	P	L	L	A	E	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E	E	L
Template Known Secondary structure																	T	S	S					T	T	T	B													G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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