Job Description P67660 Confidence 77.63% Date Wed Jan 25 15:21:01 GMT 2012 Rank 227 Aligned Residues 91 % Identity 19% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		E	A	L	R	V	M	D	A	I	D	R	R	G	.	.	.	S	F	A	A	A	A	D	E	L	G	R	V	P	S	A	L	S	Y	T	M	Q	K	L	E	E	E	L	D	V	V	L	F	D	R	S	G	H	R	T	K	F	T	N	V	G	R	M	L	L	E	R	G	R	V	L	L	E	A	A	D	K	L	T	T
Query Conservation															.	.	.
Alig confidence															.	.	.																								.																															.	.
Template Conservation																																									.																															.	.
Template Sequence		R	A	A	S	I	M	R	A	L	G	S	H	P	H	G	L	S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	I	I	N	A	L	.	E	E	E	F	L	V	E	A	L	G	P	A	G	G	F	R	L	G	P	A	L	G	Q	L	I	N	Q	A	Q	T	.	.	D	I	L	S	L	V	K	P
Template Known Secondary structure														T	T		B									S	S														.		T	T	T	S					S	S	S	S						T								T	T	T	T	.	.	T
Template Predicted Secondary structure																																									.																															.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	E	A	L	A	R	G	W	E	T	H	L	T	I	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	R	S	L	A	E	E	L	D	E	S	V	S	L	A	S
Template Known Secondary structure										S		S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions