Job Description P67660 Confidence 21.36% Date Wed Jan 25 15:21:01 GMT 2012 Rank 407 Aligned Residues 184 % Identity 11% Template c2q89A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein; PDBTitle: crystal structure of ehub in complex with hydroxyectoine Resolution 2.30 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		A	F	F	P	L	I	D	K	L	A	A	K	A	N	T	Q	L	A	I	I	T	E	V	.	L	A	G	A	W	E	R	L	E	Q	G	R	A	D	I	V	I	A	P	D	M	H	F	R	S	S	S	E	I	N	S	R	K	L	Y	T	L	M	N	V	Y	V	A	A	P	D	H	P	I	H	Q	E	P	E	P	L
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		A	A	P	D	V	A	R	E	I	F	K	R	L	G	V	A	D	V	V	A	S	I	S	E	Y	G	A	M	I	P	G	L	Q	A	G	R	H	D	A	I	T	A	G	L	F	M	K	P	E	R	C	A	A	V	A	Y	S	Q	P	I	L	C	D	A	E	A	F	A	L	K	K	G	N	P	L	G	L	K	S	Y
Template Known Secondary structure														T	T											G	G	G							T	T	S		S				S			B							T	T	S				S													T	T		T	T				B
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.
Predicted Secondary structure																																																				.																			.	.	.	.
Query SS confidence																																																				.																			.	.	.	.
Query Sequence		S	E	V	T	R	V	K	Y	R	G	I	A	V	A	D	T	A	R	E	R	P	V	L	T	V	Q	L	L	D	K	Q	P	R	L	T	V	S	T	I	E	D	K	R	Q	A	L	L	A	G	L	.	G	V	A	T	M	P	Y	P	M	V	E	K	D	I	A	E	G	R	.	.	.	.	L	R	V	V	S	P	E
Query Conservation																																																				.																			.	.	.	.
Alig confidence																																																				.																			.	.	.	.
Template Conservation
Template Sequence		K	D	I	A	D	N	P	D	A	K	I	G	A	P	G	G	G	T	E	E	K	L	A	L	E	A	G	V	P	R	D	R	V	I	V	V	P	D	G	Q	S	G	L	K	M	L	Q	D	G	R	I	D	V	Y	S	L	P	V	L	S	I	N	D	L	V	S	K	A	N	D	P	N	V	E	V	L	A	P	V	E
Template Known Secondary structure						T		T	T							T	T	S										T			G	G	G					S	S											T	S		S																	T		T	T						S		B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	S	E	I	D	I	I	M	A	W	R	R	D	S	M	G	E	A	K	S	W	C	L	R	E	I	P	K	L	F	N
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		G	A	P	V	Y	C	D	G	A	A	F	R	K	G	.	.	D	E	A	L	R	D	A	F	D	V	E	L	A	K	L	K
Template Known Secondary structure		T						B						G	G	.	.	G
Template Predicted Secondary structure																.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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