 |
Job Description | P67660 | Confidence | 71.82% | Date | Wed Jan 25 15:21:01 GMT 2012 |
Rank | 247 | Aligned Residues | 47 |
% Identity | 23% | Template | c2elhA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:cg11849-pa; |
PDBTitle: solution structure of the cenp-b n-terminal dna-binding2 domain of fruit fly distal antenna cg11849-pa
|
Resolution | UNK |
|
  |   |
1 | . | |
|
|
|
|
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | . |
. |
. |
. |
. |
K | E | R | A | L | T | L | E | A | L | R | V | M | D | A | I | D | R | R | G | . |
S | F | A | A | A | A | D | E | L | G | R | V | P | S | A | L | S | Y | T | M | Q | K | L | E | E |
Query Conservation |   |
|   | . | . | . | . | . |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   |   | . |
|   |
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |
Alig confidence |   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |
|
|
|   |
|
|
|   |
|   |
|   |
|   |
|
|
|   |
|
|
|   |   |
|
|
|   |   |
|   |
|
|
|
|
|
Template Sequence |   |
M | G | T | K | G | K | R | P | L | R | S | L | T | P | R | D | K | I | H | A | I | Q | R | I | H | D | G | E | S | K | A | S | V | A | R | D | I | G | V | P | E | S | T | L | R | G | W | C | K | N | E | D | K |
Template Known Secondary structure |   |
|
| S |
|
| S | S |
|
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|