 |
Job Description | P37635 | Confidence | 3.80% | Date | Thu Jan 5 11:56:07 GMT 2012 |
Rank | 61 | Aligned Residues | 29 |
% Identity | 41% | Template | d1a34a_ |
SCOP info | Nucleoplasmin-like/VP (viral coat and capsid proteins)
| Satellite viruses
| Satellite viruses
|
Resolution | 1.81 |
|
  |   |
137 | . | . | 140 | . | |
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | P | K | P | D | . |
. |
K | A | I | I | T | K | I | S | V | E | E | G | I | P | I | T | F | S | V | Q | T | M | F | S |
Query Conservation |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
N | P | T | P | T | W | V | R | A | I | P | F | E | V | S | V | Q | S | G | I | A | F | K | V | P | V | G | S | L | F | S |
Template Known Secondary structure |   |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |
|
| T | T |
|
|  |  |  |  | G | G | G | G |
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|