Job Description P37635 Confidence 3.50% Date Thu Jan 5 11:56:07 GMT 2012 Rank 70 Aligned Residues 77 % Identity 25% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

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		140	.	.	.	.	.	.	.	.													.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		P	D	K	A	I	I	T	K	I	.	.	.	.	.	.	.	.	.	.	.	.	S	V	E	E	G	I	P	I	T	F	S	V	.	.	Q	T	M	F	S	D	T	N	F	I	A	E	Q	R	A	D	L	P	T	N	I	K	D	I	Q	S	L	Y	Q	K	M	T	K	L	Y	I	E	H	S	E	N	K	N	R	M
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		L	T	G	V	V	L	T	K	V	D	G	D	A	R	G	G	A	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L	G	V	G	E	K	T	E	A	L	E	P	F	H	P	D	R	I	A	S	R	I	L	G	M	G	D	V	L	S	L	I	E	D	I	E	S	K	V	D	R	A	Q	A	E	K	L	A	S
Template Known Secondary structure		S								S	S	S		S			T								T	T	T			B						S	S	S	T	T							G	G	G						S	S															T	T	T						S	S	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		206	.	.	.	210			.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		K	V	F	A	G	.	.	T	N	F	I	D	F
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		K	L	K	K	G	D	G	F	D	L	N	D	F
Template Known Secondary structure		S	S						S		S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions