Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACM2
Confidence48.87%DateThu Jan 5 11:18:30 GMT 2012
Rank359Aligned Residues33
% Identity15%Templated1rp3a1
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma3 domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.....
Predicted Secondary structure 










Query SS confidence 
































Query Sequence  GTPLSEKEVSVRFNVSRQPVREAFIKLAENGLI
Query Conservation 
  
 
 


   



 





  
   


Alig confidence 
































Template Conservation 

 

  


  



 


   
         
Template Sequence  GREPTDEEVAKELGISTEELFKTLDKINFSYIL
Template Known Secondary structure  SS


TS
Template Predicted Secondary structure 












Template SS confidence 
































   110.........120.........130.........140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions