Job Description P0ACM2 Confidence 92.35% Date Thu Jan 5 11:18:30 GMT 2012 Rank 176 Aligned Residues 85 % Identity 12% Template d1okra_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor Resolution 2.4

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		34	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure														.	.	.	.																							.																																						.	.	.	.
Query SS confidence														.	.	.	.																							.																																						.	.	.	.
Query Sequence		T	P	L	S	E	K	E	V	S	V	R	F	.	.	.	.	N	V	S	R	Q	P	V	R	E	A	F	I	K	L	A	E	N	G	L	I	Q	I	.	R	P	Q	R	G	S	Y	V	N	K	I	S	M	A	Q	V	R	N	G	S	F	I	R	Q	A	I	E	C	A	V	A	R	R	A	A	S	M	.	.	.	.
Query Conservation														.	.	.	.																							.																																						.	.	.	.
Alig confidence														.	.	.	.																							.																																						.	.	.	.
Template Conservation
Template Sequence		K	Y	A	S	A	N	N	I	I	E	E	I	Q	M	Q	K	D	W	S	P	K	T	I	R	T	L	I	T	R	L	Y	K	K	G	F	I	D	R	K	K	D	N	K	I	F	Q	Y	Y	S	L	V	E	E	S	D	I	K	Y	K	T	S	K	N	F	I	N	K	V	Y	K	G	G	F	N	S	L	V	L	N	F
Template Known Secondary structure		S	S																																T	S							T	T							S	S																		S	T	T
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
							105	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	I	T	E	S	Q	C	Y	Q	L	E	Q	N	L	H
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		V	E	K	E	D	L	S	Q	D	E	I	E	E	L	R	N	I	L	N
Template Known Secondary structure					S															T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions