 |
Job Description | P0ACM2 | Confidence | 28.71% | Date | Thu Jan 5 11:18:30 GMT 2012 |
Rank | 496 | Aligned Residues | 53 |
% Identity | 15% | Template | d1hsta_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Linker histone H1/H5
|
Resolution | 2.60 |
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
. | |
. | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . |
| . |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | R | R | D | I | V | H | C | L | I | A | P | G | T | P | L | . |
S | . |
E | K | E | V | S | V | R | F | N | V | S | . |
. |
. |
R | Q | P | V | R | E | A | F | I | K | L | A | E | N | G | L | I | Q | I | R | P | Q | R | G | S |
Query Conservation |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
| . |   | . |
|   |
|
|
|   |   |   |
|
|
| . | . | . |
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|
|   |   |
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |   |
|   |   |
|   |
|
|
|   |
|
|   |
|   |
Template Sequence |   |
I | A | A | A | I | R | A | E | K | S | R | G | G | S | S | R | Q | S | I | Q | K | Y | I | K | S | H | Y | K | V | G | H | N | A | D | L | Q | I | K | L | S | I | R | R | L | L | A | A | G | V | L | K | Q | T | K | G | V | G | A |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
|
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |
|
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|