 |
Job Description | P0ACM2 | Confidence | 30.70% | Date | Thu Jan 5 11:18:30 GMT 2012 |
Rank | 478 | Aligned Residues | 43 |
% Identity | 16% | Template | d1cf7a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Cell cycle transcription factor e2f-dp
|
Resolution | 2.60 |
|
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | G | T | P | L | S | E | K | E | V | S | V | R | F | N | V | . |
S | R | Q | P | V | R | E | A | F | I | K | L | A | E | N | G | L | I | Q | I | R | P | Q | R | G | S | Y |
Query Conservation |   |
|
|   |   |
|   |
|   |
|
|
|   |   |   |
|
| . |
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |
|
|   |   |
|   |
|   |   |
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|   |   |
|
|   |   |   |
Template Sequence |   |
K | D | G | V | L | D | L | K | L | A | A | D | T | L | A | V | R | Q | K | R | R | I | Y | D | I | T | N | V | L | E | G | I | G | L | I | E | K | K | S | K | N | S | I | Q |
Template Known Secondary structure |   |
S | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|