 |
Job Description | P0ACM2 | Confidence | 29.90% | Date | Thu Jan 5 11:18:30 GMT 2012 |
Rank | 487 | Aligned Residues | 47 |
% Identity | 23% | Template | d1bl0a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| AraC type transcriptional activator
|
Resolution | 2.30 |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | I | Y | R | I | L | R | R | D | I | V | H | C | L | I | A | P | G | T | P | L | S | E | K | E | V | S | V | R | F | N | V | S | R | Q | P | V | R | E | A | F | I | K | L | A | E | N | G | L |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|   |
|   |
|
|
|   |   |   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |
|
|   |   |   | . | . | . |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |
|   |
|   |
Template Sequence |   |
A | I | T | I | H | S | I | L | D | W | I | E | D | N | . |
. |
. |
L | E | S | P | L | S | L | E | K | V | S | E | R | S | G | Y | S | K | W | H | L | Q | R | M | F | K | K | E | T | G | H | S | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | T | T | S |
|
|
|
|  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|