Job Description P0ACM2 Confidence 100.00% Date Thu Jan 5 11:18:30 GMT 2012 Rank 3 Aligned Residues 204 % Identity 19% Template c3fmsA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, gntr family; PDBTitle: crystal structure of tm0439, a gntr transcriptional2 regulator Resolution 2.20 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	N	Q	Q	I	Y	R	I	L	R	R	D	I	V	H	C	L	I	A	P	G	T	P	L	S	E	K	E	V	S	V	R	F	N	V	S	R	Q	P	V	R	E	A	F	I	K	L	A	E	N	G	L	I	Q	I	R	P	Q	R	G	S	Y	V	N	K	I	S	M	A	Q	V	R	N	G	S	F	I	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	R	T	K	V	Y	N	L	L	K	E	X	I	L	N	H	E	L	K	L	G	E	K	L	N	V	R	E	L	S	E	K	L	G	I	S	F	T	P	V	R	D	A	L	L	Q	L	A	T	E	G	L	V	K	V	V	P	R	V	G	F	F	V	T	D	V	D	E	K	F	I	R	E	T	I	E	T	R	I
Template Known Secondary structure																	T	T	S	S		T	T		B											T																	T	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	E	C	A	V	A	R	R	A	A	S	M	I	T	E	S	Q	C	Y	Q	L	E	Q	N	L	H	Q	Q	R	I	A	I	E	R	K	Q	L	D	D	F	F	E	L	D	D	N	F	H	Q	L	L	T	Q	I	A	D	C	Q	L	A	W	D	T	I	E	N	L	K	A	T	V	D	R	V	R	Y	M	S	F
Query Conservation
Alig confidence															.	.																																																																.	.
Template Conservation															.	.																																																																.	.
Template Sequence		X	X	E	V	F	C	L	E	N	Y	F	D	K	.	.	I	A	G	S	E	E	L	L	E	I	K	G	E	I	D	D	V	A	A	S	A	A	R	E	I	F	D	D	S	D	E	R	L	H	K	L	F	I	R	A	S	G	N	E	L	I	I	S	L	Y	E	K	I	W	D	R	I	D	L	V	R	H	L	.	.
Template Known Secondary structure											S				.	.			T																																					T	T												T										T	.	.
Template Predicted Secondary structure															.	.																																																																.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	V	S	P	P	E	M	L	L	R	Q	H	L	D	I	F	S	A	L	Q	K	R	D	G	D	A	V	E	R	A	M	T	Q	H	L	Q	E	I	S	E	S	V	R	Q	I	R	Q	E	N
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	N	E	R	Y	V	V	S	N	R	E	H	K	E	L	I	E	R	I	I	S	G	D	K	E	G	A	I	E	K	L	K	E	H	L	K	N	V	E	A	E	T	I	K	N	L	Y	T	Y
Template Known Secondary structure		.	.																				T	T																								G	G	G	S
Template Predicted Secondary structure		.	.
Template SS confidence
				164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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